Protein–RNA interactions for Protein: O08576

Rundc3a, RUN domain-containing protein 3A, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rundc3aO08576 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rundc3aO08576 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Rundc3aO08576 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rundc3aO08576 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rundc3aO08576 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rundc3aO08576 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rundc3aO08576 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rundc3aO08576 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rundc3aO08576 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rundc3aO08576 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.71■□□□□ 0.75
Rundc3aO08576 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Rundc3aO08576 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rundc3aO08576 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rundc3aO08576 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rundc3aO08576 Gm10399-202ENSMUST00000202768 748 ntBASIC19.71■□□□□ 0.75
Rundc3aO08576 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Rundc3aO08576 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rundc3aO08576 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rundc3aO08576 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rundc3aO08576 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rundc3aO08576 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Rundc3aO08576 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rundc3aO08576 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Rundc3aO08576 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rundc3aO08576 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rundc3aO08576 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rundc3aO08576 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.7■□□□□ 0.74
Rundc3aO08576 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rundc3aO08576 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Rundc3aO08576 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rundc3aO08576 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.69■□□□□ 0.74
Rundc3aO08576 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.69■□□□□ 0.74
Rundc3aO08576 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.69■□□□□ 0.74
Rundc3aO08576 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.69■□□□□ 0.74
Rundc3aO08576 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rundc3aO08576 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rundc3aO08576 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rundc3aO08576 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rundc3aO08576 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rundc3aO08576 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rundc3aO08576 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.68■□□□□ 0.74
Rundc3aO08576 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.68■□□□□ 0.74
Rundc3aO08576 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rundc3aO08576 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rundc3aO08576 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rundc3aO08576 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rundc3aO08576 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rundc3aO08576 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rundc3aO08576 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rundc3aO08576 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Rundc3aO08576 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.67■□□□□ 0.74
Rundc3aO08576 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rundc3aO08576 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rundc3aO08576 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rundc3aO08576 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rundc3aO08576 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.66■□□□□ 0.74
Rundc3aO08576 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rundc3aO08576 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Rundc3aO08576 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.66■□□□□ 0.74
Rundc3aO08576 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rundc3aO08576 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rundc3aO08576 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rundc3aO08576 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rundc3aO08576 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rundc3aO08576 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rundc3aO08576 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rundc3aO08576 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Rundc3aO08576 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Rundc3aO08576 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rundc3aO08576 Golph3-202ENSMUST00000226517 2359 ntBASIC19.65■□□□□ 0.74
Rundc3aO08576 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rundc3aO08576 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rundc3aO08576 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Rundc3aO08576 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rundc3aO08576 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rundc3aO08576 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Rundc3aO08576 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Rundc3aO08576 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rundc3aO08576 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rundc3aO08576 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rundc3aO08576 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Rundc3aO08576 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rundc3aO08576 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rundc3aO08576 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rundc3aO08576 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rundc3aO08576 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rundc3aO08576 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.62■□□□□ 0.73
Rundc3aO08576 Gm10232-201ENSMUST00000089221 720 ntBASIC19.62■□□□□ 0.73
Rundc3aO08576 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Rundc3aO08576 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Rundc3aO08576 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rundc3aO08576 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rundc3aO08576 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.61■□□□□ 0.73
Rundc3aO08576 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rundc3aO08576 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rundc3aO08576 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.61■□□□□ 0.73
Rundc3aO08576 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
Rundc3aO08576 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rundc3aO08576 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rundc3aO08576 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms