Protein–RNA interactions for Protein: J3QMY9

Top6bl, Type 2 DNA topoisomerase 6 subunit B-like, mousemouse

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top6blJ3QMY9 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.27■■□□□ 1
Top6blJ3QMY9 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.27■■□□□ 1
Top6blJ3QMY9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.27■■□□□ 1
Top6blJ3QMY9 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.27■■□□□ 1
Top6blJ3QMY9 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Top6blJ3QMY9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Top6blJ3QMY9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Top6blJ3QMY9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Top6blJ3QMY9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Top6blJ3QMY9 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Top6blJ3QMY9 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Top6blJ3QMY9 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Top6blJ3QMY9 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Top6blJ3QMY9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Top6blJ3QMY9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Top6blJ3QMY9 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Top6blJ3QMY9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.26■□□□□ 0.99
Top6blJ3QMY9 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Top6blJ3QMY9 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Top6blJ3QMY9 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Top6blJ3QMY9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Top6blJ3QMY9 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Top6blJ3QMY9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Top6blJ3QMY9 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Top6blJ3QMY9 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Top6blJ3QMY9 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Top6blJ3QMY9 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Top6blJ3QMY9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Top6blJ3QMY9 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Top6blJ3QMY9 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Top6blJ3QMY9 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Top6blJ3QMY9 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.24■□□□□ 0.99
Top6blJ3QMY9 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Top6blJ3QMY9 Gm12821-201ENSMUST00000120022 600 ntBASIC21.24■□□□□ 0.99
Top6blJ3QMY9 Gm27454-201ENSMUST00000185090 204 ntBASIC21.24■□□□□ 0.99
Top6blJ3QMY9 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.24■□□□□ 0.99
Top6blJ3QMY9 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.24■□□□□ 0.99
Top6blJ3QMY9 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Top6blJ3QMY9 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Top6blJ3QMY9 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Top6blJ3QMY9 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Top6blJ3QMY9 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Top6blJ3QMY9 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Top6blJ3QMY9 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Top6blJ3QMY9 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Top6blJ3QMY9 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Top6blJ3QMY9 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Top6blJ3QMY9 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Top6blJ3QMY9 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Top6blJ3QMY9 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Top6blJ3QMY9 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Top6blJ3QMY9 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Top6blJ3QMY9 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Top6blJ3QMY9 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Top6blJ3QMY9 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Top6blJ3QMY9 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Top6blJ3QMY9 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Top6blJ3QMY9 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Top6blJ3QMY9 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
Top6blJ3QMY9 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Top6blJ3QMY9 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Top6blJ3QMY9 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Top6blJ3QMY9 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Top6blJ3QMY9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Top6blJ3QMY9 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Top6blJ3QMY9 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Top6blJ3QMY9 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Top6blJ3QMY9 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.2■□□□□ 0.98
Top6blJ3QMY9 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Top6blJ3QMY9 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.2■□□□□ 0.98
Top6blJ3QMY9 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.2■□□□□ 0.98
Top6blJ3QMY9 Mir6236-201ENSMUST00000184437 123 ntBASIC21.2■□□□□ 0.98
Top6blJ3QMY9 Gm43137-201ENSMUST00000198052 594 ntBASIC21.2■□□□□ 0.98
Top6blJ3QMY9 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.2■□□□□ 0.98
Top6blJ3QMY9 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Top6blJ3QMY9 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Top6blJ3QMY9 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Top6blJ3QMY9 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Top6blJ3QMY9 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Top6blJ3QMY9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Top6blJ3QMY9 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Top6blJ3QMY9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Top6blJ3QMY9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Top6blJ3QMY9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Top6blJ3QMY9 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Top6blJ3QMY9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.19■□□□□ 0.98
Top6blJ3QMY9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.19■□□□□ 0.98
Top6blJ3QMY9 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.19■□□□□ 0.98
Top6blJ3QMY9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
Top6blJ3QMY9 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Top6blJ3QMY9 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Top6blJ3QMY9 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Top6blJ3QMY9 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Top6blJ3QMY9 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.18■□□□□ 0.98
Top6blJ3QMY9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Top6blJ3QMY9 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Top6blJ3QMY9 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Top6blJ3QMY9 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Top6blJ3QMY9 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Top6blJ3QMY9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 195.5 ms