Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim55G3X8Y1 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim55G3X8Y1 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim55G3X8Y1 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.63■□□□□ 0.89
Trim55G3X8Y1 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim55G3X8Y1 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim55G3X8Y1 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim55G3X8Y1 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
Trim55G3X8Y1 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim55G3X8Y1 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Trim55G3X8Y1 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim55G3X8Y1 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim55G3X8Y1 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim55G3X8Y1 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim55G3X8Y1 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim55G3X8Y1 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Trim55G3X8Y1 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.61■□□□□ 0.89
Trim55G3X8Y1 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trim55G3X8Y1 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.61■□□□□ 0.89
Trim55G3X8Y1 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trim55G3X8Y1 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
Trim55G3X8Y1 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trim55G3X8Y1 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.61■□□□□ 0.89
Trim55G3X8Y1 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim55G3X8Y1 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim55G3X8Y1 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim55G3X8Y1 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim55G3X8Y1 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim55G3X8Y1 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim55G3X8Y1 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim55G3X8Y1 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim55G3X8Y1 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim55G3X8Y1 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim55G3X8Y1 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim55G3X8Y1 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim55G3X8Y1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim55G3X8Y1 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim55G3X8Y1 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Trim55G3X8Y1 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim55G3X8Y1 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trim55G3X8Y1 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trim55G3X8Y1 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim55G3X8Y1 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trim55G3X8Y1 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim55G3X8Y1 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim55G3X8Y1 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Trim55G3X8Y1 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.59■□□□□ 0.89
Trim55G3X8Y1 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim55G3X8Y1 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim55G3X8Y1 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim55G3X8Y1 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Trim55G3X8Y1 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.59■□□□□ 0.89
Trim55G3X8Y1 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim55G3X8Y1 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Trim55G3X8Y1 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Trim55G3X8Y1 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Trim55G3X8Y1 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim55G3X8Y1 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim55G3X8Y1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim55G3X8Y1 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Trim55G3X8Y1 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.58■□□□□ 0.88
Trim55G3X8Y1 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim55G3X8Y1 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim55G3X8Y1 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim55G3X8Y1 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim55G3X8Y1 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.57■□□□□ 0.88
Trim55G3X8Y1 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim55G3X8Y1 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim55G3X8Y1 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.57■□□□□ 0.88
Trim55G3X8Y1 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Trim55G3X8Y1 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Trim55G3X8Y1 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim55G3X8Y1 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Trim55G3X8Y1 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim55G3X8Y1 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim55G3X8Y1 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim55G3X8Y1 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim55G3X8Y1 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Trim55G3X8Y1 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.56■□□□□ 0.88
Trim55G3X8Y1 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Trim55G3X8Y1 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trim55G3X8Y1 Rarb-207ENSMUST00000225921 2756 ntBASIC20.56■□□□□ 0.88
Trim55G3X8Y1 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.55■□□□□ 0.88
Trim55G3X8Y1 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.55■□□□□ 0.88
Trim55G3X8Y1 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim55G3X8Y1 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim55G3X8Y1 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim55G3X8Y1 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.55■□□□□ 0.88
Trim55G3X8Y1 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim55G3X8Y1 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim55G3X8Y1 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim55G3X8Y1 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trim55G3X8Y1 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim55G3X8Y1 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.54■□□□□ 0.88
Trim55G3X8Y1 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trim55G3X8Y1 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim55G3X8Y1 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim55G3X8Y1 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim55G3X8Y1 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim55G3X8Y1 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms