Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC24.58■■□□□ 1.53
Ube4aE9Q735 Gm40848-201ENSMUST00000221998 324 ntBASIC24.58■■□□□ 1.53
Ube4aE9Q735 Gm10493-201ENSMUST00000097270 612 ntBASIC24.58■■□□□ 1.53
Ube4aE9Q735 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Ube4aE9Q735 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Ube4aE9Q735 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC24.57■■□□□ 1.52
Ube4aE9Q735 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ube4aE9Q735 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ube4aE9Q735 AC165080.2-201ENSMUST00000217491 1530 ntBASIC24.56■■□□□ 1.52
Ube4aE9Q735 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Ube4aE9Q735 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC24.56■■□□□ 1.52
Ube4aE9Q735 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ube4aE9Q735 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ube4aE9Q735 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ube4aE9Q735 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ube4aE9Q735 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC24.56■■□□□ 1.52
Ube4aE9Q735 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Ube4aE9Q735 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Ube4aE9Q735 Mir6236-201ENSMUST00000184437 123 ntBASIC24.55■■□□□ 1.52
Ube4aE9Q735 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Ube4aE9Q735 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ube4aE9Q735 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Ube4aE9Q735 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ube4aE9Q735 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ube4aE9Q735 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC24.54■■□□□ 1.52
Ube4aE9Q735 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ube4aE9Q735 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ube4aE9Q735 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
Ube4aE9Q735 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ube4aE9Q735 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ube4aE9Q735 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
Ube4aE9Q735 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ube4aE9Q735 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ube4aE9Q735 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ube4aE9Q735 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC24.52■■□□□ 1.52
Ube4aE9Q735 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC24.52■■□□□ 1.52
Ube4aE9Q735 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
Ube4aE9Q735 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
Ube4aE9Q735 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ube4aE9Q735 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC24.52■■□□□ 1.52
Ube4aE9Q735 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Ube4aE9Q735 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ube4aE9Q735 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ube4aE9Q735 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ube4aE9Q735 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Ube4aE9Q735 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC24.51■■□□□ 1.51
Ube4aE9Q735 AC122428.2-201ENSMUST00000216321 1832 ntBASIC24.51■■□□□ 1.51
Ube4aE9Q735 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ube4aE9Q735 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC24.5■■□□□ 1.51
Ube4aE9Q735 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ube4aE9Q735 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ube4aE9Q735 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
Ube4aE9Q735 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ube4aE9Q735 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ube4aE9Q735 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ube4aE9Q735 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ube4aE9Q735 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Ube4aE9Q735 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ube4aE9Q735 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC24.49■■□□□ 1.51
Ube4aE9Q735 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC24.49■■□□□ 1.51
Ube4aE9Q735 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ube4aE9Q735 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ube4aE9Q735 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ube4aE9Q735 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
Ube4aE9Q735 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC24.48■■□□□ 1.51
Ube4aE9Q735 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ube4aE9Q735 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC24.48■■□□□ 1.51
Ube4aE9Q735 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ube4aE9Q735 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ube4aE9Q735 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ube4aE9Q735 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ube4aE9Q735 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC24.47■■□□□ 1.51
Ube4aE9Q735 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ube4aE9Q735 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ube4aE9Q735 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ube4aE9Q735 Gm10129-202ENSMUST00000193100 1316 ntBASIC24.47■■□□□ 1.51
Ube4aE9Q735 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Ube4aE9Q735 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ube4aE9Q735 AC164629.5-201ENSMUST00000220387 632 ntBASIC24.47■■□□□ 1.51
Ube4aE9Q735 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ube4aE9Q735 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Ube4aE9Q735 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Ube4aE9Q735 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ube4aE9Q735 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Ube4aE9Q735 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
Ube4aE9Q735 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ube4aE9Q735 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ube4aE9Q735 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Ube4aE9Q735 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ube4aE9Q735 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Ube4aE9Q735 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Ube4aE9Q735 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.51
Ube4aE9Q735 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Ube4aE9Q735 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ube4aE9Q735 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ube4aE9Q735 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ube4aE9Q735 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ube4aE9Q735 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC24.44■■□□□ 1.5
Ube4aE9Q735 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ube4aE9Q735 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms