Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col6a3E9PWQ3 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col6a3E9PWQ3 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col6a3E9PWQ3 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col6a3E9PWQ3 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col6a3E9PWQ3 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col6a3E9PWQ3 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col6a3E9PWQ3 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col6a3E9PWQ3 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Col6a3E9PWQ3 Gm10517-202ENSMUST00000192970 758 ntBASIC20.79■□□□□ 0.92
Col6a3E9PWQ3 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Col6a3E9PWQ3 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.79■□□□□ 0.92
Col6a3E9PWQ3 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Col6a3E9PWQ3 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Col6a3E9PWQ3 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Col6a3E9PWQ3 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Col6a3E9PWQ3 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.79■□□□□ 0.92
Col6a3E9PWQ3 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Col6a3E9PWQ3 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Col6a3E9PWQ3 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col6a3E9PWQ3 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Col6a3E9PWQ3 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col6a3E9PWQ3 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Col6a3E9PWQ3 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC20.78■□□□□ 0.92
Col6a3E9PWQ3 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col6a3E9PWQ3 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Col6a3E9PWQ3 Gm9988-201ENSMUST00000069786 435 ntBASIC20.78■□□□□ 0.92
Col6a3E9PWQ3 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.78■□□□□ 0.92
Col6a3E9PWQ3 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.78■□□□□ 0.92
Col6a3E9PWQ3 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.78■□□□□ 0.92
Col6a3E9PWQ3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col6a3E9PWQ3 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col6a3E9PWQ3 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Col6a3E9PWQ3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Col6a3E9PWQ3 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Col6a3E9PWQ3 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
Col6a3E9PWQ3 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Col6a3E9PWQ3 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.77■□□□□ 0.92
Col6a3E9PWQ3 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.77■□□□□ 0.91
Col6a3E9PWQ3 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.91
Col6a3E9PWQ3 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.77■□□□□ 0.91
Col6a3E9PWQ3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Col6a3E9PWQ3 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.76■□□□□ 0.91
Col6a3E9PWQ3 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col6a3E9PWQ3 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col6a3E9PWQ3 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col6a3E9PWQ3 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.76■□□□□ 0.91
Col6a3E9PWQ3 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col6a3E9PWQ3 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC20.76■□□□□ 0.91
Col6a3E9PWQ3 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Col6a3E9PWQ3 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC20.75■□□□□ 0.91
Col6a3E9PWQ3 Gm43530-201ENSMUST00000195920 274 ntBASIC20.75■□□□□ 0.91
Col6a3E9PWQ3 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col6a3E9PWQ3 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.75■□□□□ 0.91
Col6a3E9PWQ3 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col6a3E9PWQ3 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Col6a3E9PWQ3 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col6a3E9PWQ3 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC20.75■□□□□ 0.91
Col6a3E9PWQ3 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col6a3E9PWQ3 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Col6a3E9PWQ3 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Col6a3E9PWQ3 Gm11421-201ENSMUST00000122124 294 ntBASIC20.75■□□□□ 0.91
Col6a3E9PWQ3 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Col6a3E9PWQ3 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Col6a3E9PWQ3 Gm6576-201ENSMUST00000169678 883 ntBASIC20.74■□□□□ 0.91
Col6a3E9PWQ3 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col6a3E9PWQ3 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC20.74■□□□□ 0.91
Col6a3E9PWQ3 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col6a3E9PWQ3 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC20.74■□□□□ 0.91
Col6a3E9PWQ3 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col6a3E9PWQ3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Col6a3E9PWQ3 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Col6a3E9PWQ3 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.73■□□□□ 0.91
Col6a3E9PWQ3 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Col6a3E9PWQ3 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col6a3E9PWQ3 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.73■□□□□ 0.91
Col6a3E9PWQ3 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Col6a3E9PWQ3 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col6a3E9PWQ3 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.73■□□□□ 0.91
Col6a3E9PWQ3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
Col6a3E9PWQ3 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.73■□□□□ 0.91
Col6a3E9PWQ3 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Col6a3E9PWQ3 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col6a3E9PWQ3 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col6a3E9PWQ3 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col6a3E9PWQ3 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col6a3E9PWQ3 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.72■□□□□ 0.91
Col6a3E9PWQ3 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC20.72■□□□□ 0.91
Col6a3E9PWQ3 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.72■□□□□ 0.91
Col6a3E9PWQ3 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Col6a3E9PWQ3 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.72■□□□□ 0.91
Col6a3E9PWQ3 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC20.72■□□□□ 0.91
Col6a3E9PWQ3 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.72■□□□□ 0.91
Col6a3E9PWQ3 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col6a3E9PWQ3 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col6a3E9PWQ3 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col6a3E9PWQ3 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Col6a3E9PWQ3 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col6a3E9PWQ3 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col6a3E9PWQ3 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms