Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shank1D3YZU1 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Shank1D3YZU1 Nespas-201ENSMUST00000143738 1083 ntBASIC18.14■□□□□ 0.49
Shank1D3YZU1 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shank1D3YZU1 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.14■□□□□ 0.49
Shank1D3YZU1 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.14■□□□□ 0.49
Shank1D3YZU1 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shank1D3YZU1 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Shank1D3YZU1 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shank1D3YZU1 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Shank1D3YZU1 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shank1D3YZU1 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.13■□□□□ 0.49
Shank1D3YZU1 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shank1D3YZU1 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shank1D3YZU1 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shank1D3YZU1 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Shank1D3YZU1 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shank1D3YZU1 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shank1D3YZU1 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Shank1D3YZU1 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.13■□□□□ 0.49
Shank1D3YZU1 Gm42778-201ENSMUST00000199644 553 ntBASIC18.13■□□□□ 0.49
Shank1D3YZU1 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Shank1D3YZU1 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Shank1D3YZU1 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Shank1D3YZU1 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Shank1D3YZU1 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Shank1D3YZU1 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Shank1D3YZU1 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Shank1D3YZU1 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Shank1D3YZU1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Shank1D3YZU1 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Shank1D3YZU1 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Shank1D3YZU1 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Shank1D3YZU1 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shank1D3YZU1 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Shank1D3YZU1 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shank1D3YZU1 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.11■□□□□ 0.49
Shank1D3YZU1 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shank1D3YZU1 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shank1D3YZU1 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Shank1D3YZU1 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Shank1D3YZU1 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Shank1D3YZU1 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.11■□□□□ 0.49
Shank1D3YZU1 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Shank1D3YZU1 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Shank1D3YZU1 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.1■□□□□ 0.49
Shank1D3YZU1 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Shank1D3YZU1 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Shank1D3YZU1 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Shank1D3YZU1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Shank1D3YZU1 Gm11421-201ENSMUST00000122124 294 ntBASIC18.1■□□□□ 0.49
Shank1D3YZU1 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Shank1D3YZU1 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Shank1D3YZU1 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Shank1D3YZU1 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Shank1D3YZU1 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
Shank1D3YZU1 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Shank1D3YZU1 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Shank1D3YZU1 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Shank1D3YZU1 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Shank1D3YZU1 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Shank1D3YZU1 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Shank1D3YZU1 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Shank1D3YZU1 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Shank1D3YZU1 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Shank1D3YZU1 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Shank1D3YZU1 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Shank1D3YZU1 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Shank1D3YZU1 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Shank1D3YZU1 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Shank1D3YZU1 Gm10602-201ENSMUST00000098239 609 ntBASIC18.08■□□□□ 0.48
Shank1D3YZU1 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Shank1D3YZU1 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Shank1D3YZU1 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Shank1D3YZU1 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Shank1D3YZU1 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Shank1D3YZU1 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Shank1D3YZU1 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Shank1D3YZU1 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Shank1D3YZU1 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.07■□□□□ 0.48
Shank1D3YZU1 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Shank1D3YZU1 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Shank1D3YZU1 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Shank1D3YZU1 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.06■□□□□ 0.48
Shank1D3YZU1 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Shank1D3YZU1 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Shank1D3YZU1 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.06■□□□□ 0.48
Shank1D3YZU1 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Shank1D3YZU1 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Shank1D3YZU1 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Shank1D3YZU1 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Shank1D3YZU1 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Shank1D3YZU1 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Shank1D3YZU1 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.06■□□□□ 0.48
Shank1D3YZU1 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Shank1D3YZU1 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Shank1D3YZU1 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Shank1D3YZU1 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Shank1D3YZU1 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Shank1D3YZU1 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms