Protein–RNA interactions for Protein: D3YXG0

Hmcn1, Hemicentin-1, mousemouse

Predictions only

Length 5,634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmcn1D3YXG0 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Hmcn1D3YXG0 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Hmcn1D3YXG0 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Hmcn1D3YXG0 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC6.02□□□□□ -1.45
Hmcn1D3YXG0 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Hmcn1D3YXG0 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC6.02□□□□□ -1.45
Hmcn1D3YXG0 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC6.02□□□□□ -1.45
Hmcn1D3YXG0 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC6.02□□□□□ -1.45
Hmcn1D3YXG0 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC6.02□□□□□ -1.45
Hmcn1D3YXG0 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Hmcn1D3YXG0 Ap3s1-204ENSMUST00000225520 957 ntBASIC6.02□□□□□ -1.45
Hmcn1D3YXG0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Hmcn1D3YXG0 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Hmcn1D3YXG0 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
Hmcn1D3YXG0 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
Hmcn1D3YXG0 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC6.02□□□□□ -1.45
Hmcn1D3YXG0 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Hmcn1D3YXG0 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Hmcn1D3YXG0 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
Hmcn1D3YXG0 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Hmcn1D3YXG0 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC6.01□□□□□ -1.45
Hmcn1D3YXG0 AL672049.1-201ENSMUST00000197943 91 ntBASIC6.01□□□□□ -1.45
Hmcn1D3YXG0 Gm9987-201ENSMUST00000069768 567 ntBASIC6.01□□□□□ -1.45
Hmcn1D3YXG0 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Hmcn1D3YXG0 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Hmcn1D3YXG0 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Hmcn1D3YXG0 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Hmcn1D3YXG0 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Hmcn1D3YXG0 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC6.01□□□□□ -1.45
Hmcn1D3YXG0 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Hmcn1D3YXG0 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Hmcn1D3YXG0 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Hmcn1D3YXG0 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Hmcn1D3YXG0 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Hmcn1D3YXG0 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
Hmcn1D3YXG0 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Hmcn1D3YXG0 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Hmcn1D3YXG0 AC166356.1-201ENSMUST00000228236 1426 ntBASIC6.01□□□□□ -1.45
Hmcn1D3YXG0 Gm11249-201ENSMUST00000117071 859 ntBASIC6.01□□□□□ -1.45
Hmcn1D3YXG0 Gm6433-201ENSMUST00000118634 875 ntBASIC6.01□□□□□ -1.45
Hmcn1D3YXG0 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC6.01□□□□□ -1.45
Hmcn1D3YXG0 Gm9988-201ENSMUST00000069786 435 ntBASIC6.01□□□□□ -1.45
Hmcn1D3YXG0 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Hmcn1D3YXG0 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Hmcn1D3YXG0 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Hmcn1D3YXG0 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Hmcn1D3YXG0 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Hmcn1D3YXG0 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC6□□□□□ -1.45
Hmcn1D3YXG0 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC6□□□□□ -1.45
Hmcn1D3YXG0 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
Hmcn1D3YXG0 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Hmcn1D3YXG0 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Hmcn1D3YXG0 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC6□□□□□ -1.45
Hmcn1D3YXG0 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC6□□□□□ -1.45
Hmcn1D3YXG0 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Hmcn1D3YXG0 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Hmcn1D3YXG0 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Hmcn1D3YXG0 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC6□□□□□ -1.45
Hmcn1D3YXG0 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Hmcn1D3YXG0 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Hmcn1D3YXG0 Gm5867-201ENSMUST00000063197 592 ntBASIC6□□□□□ -1.45
Hmcn1D3YXG0 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Hmcn1D3YXG0 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC6□□□□□ -1.45
Hmcn1D3YXG0 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC6□□□□□ -1.45
Hmcn1D3YXG0 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Hmcn1D3YXG0 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC6□□□□□ -1.45
Hmcn1D3YXG0 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Hmcn1D3YXG0 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Hmcn1D3YXG0 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC6□□□□□ -1.45
Hmcn1D3YXG0 Gm6576-201ENSMUST00000169678 883 ntBASIC6□□□□□ -1.45
Hmcn1D3YXG0 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC6□□□□□ -1.45
Hmcn1D3YXG0 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC6□□□□□ -1.45
Hmcn1D3YXG0 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC6□□□□□ -1.45
Hmcn1D3YXG0 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Hmcn1D3YXG0 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
Hmcn1D3YXG0 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Hmcn1D3YXG0 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC5.99□□□□□ -1.45
Hmcn1D3YXG0 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Hmcn1D3YXG0 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Hmcn1D3YXG0 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Hmcn1D3YXG0 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Hmcn1D3YXG0 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Hmcn1D3YXG0 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Hmcn1D3YXG0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Hmcn1D3YXG0 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC5.99□□□□□ -1.45
Hmcn1D3YXG0 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC5.99□□□□□ -1.45
Hmcn1D3YXG0 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Hmcn1D3YXG0 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Hmcn1D3YXG0 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Hmcn1D3YXG0 Gm14281-201ENSMUST00000121700 1294 ntBASIC5.99□□□□□ -1.45
Hmcn1D3YXG0 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC5.99□□□□□ -1.45
Hmcn1D3YXG0 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC5.99□□□□□ -1.45
Hmcn1D3YXG0 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
Hmcn1D3YXG0 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Hmcn1D3YXG0 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Hmcn1D3YXG0 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
Hmcn1D3YXG0 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC5.99□□□□□ -1.45
Hmcn1D3YXG0 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Hmcn1D3YXG0 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Hmcn1D3YXG0 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms