Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clip3B9EHT4 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clip3B9EHT4 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clip3B9EHT4 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.41■□□□□ 0.7
Clip3B9EHT4 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Clip3B9EHT4 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clip3B9EHT4 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Clip3B9EHT4 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.41■□□□□ 0.7
Clip3B9EHT4 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clip3B9EHT4 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clip3B9EHT4 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clip3B9EHT4 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.41■□□□□ 0.7
Clip3B9EHT4 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clip3B9EHT4 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clip3B9EHT4 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clip3B9EHT4 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Clip3B9EHT4 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Clip3B9EHT4 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.4■□□□□ 0.7
Clip3B9EHT4 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clip3B9EHT4 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clip3B9EHT4 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clip3B9EHT4 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.39■□□□□ 0.7
Clip3B9EHT4 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clip3B9EHT4 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clip3B9EHT4 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Clip3B9EHT4 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Clip3B9EHT4 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Clip3B9EHT4 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clip3B9EHT4 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clip3B9EHT4 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Clip3B9EHT4 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clip3B9EHT4 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Clip3B9EHT4 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clip3B9EHT4 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clip3B9EHT4 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.38■□□□□ 0.69
Clip3B9EHT4 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.38■□□□□ 0.69
Clip3B9EHT4 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.38■□□□□ 0.69
Clip3B9EHT4 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Clip3B9EHT4 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.38■□□□□ 0.69
Clip3B9EHT4 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.38■□□□□ 0.69
Clip3B9EHT4 Gm7143-201ENSMUST00000222811 859 ntBASIC19.38■□□□□ 0.69
Clip3B9EHT4 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clip3B9EHT4 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clip3B9EHT4 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clip3B9EHT4 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clip3B9EHT4 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.37■□□□□ 0.69
Clip3B9EHT4 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clip3B9EHT4 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clip3B9EHT4 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Clip3B9EHT4 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clip3B9EHT4 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.37■□□□□ 0.69
Clip3B9EHT4 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Clip3B9EHT4 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
Clip3B9EHT4 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clip3B9EHT4 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clip3B9EHT4 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clip3B9EHT4 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Clip3B9EHT4 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Clip3B9EHT4 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clip3B9EHT4 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clip3B9EHT4 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clip3B9EHT4 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clip3B9EHT4 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clip3B9EHT4 Gm12821-201ENSMUST00000120022 600 ntBASIC19.36■□□□□ 0.69
Clip3B9EHT4 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.36■□□□□ 0.69
Clip3B9EHT4 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Clip3B9EHT4 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clip3B9EHT4 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Clip3B9EHT4 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clip3B9EHT4 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Clip3B9EHT4 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clip3B9EHT4 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clip3B9EHT4 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clip3B9EHT4 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.35■□□□□ 0.69
Clip3B9EHT4 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
Clip3B9EHT4 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Clip3B9EHT4 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Clip3B9EHT4 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clip3B9EHT4 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clip3B9EHT4 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clip3B9EHT4 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Clip3B9EHT4 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clip3B9EHT4 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clip3B9EHT4 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Clip3B9EHT4 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clip3B9EHT4 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.34■□□□□ 0.69
Clip3B9EHT4 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Clip3B9EHT4 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clip3B9EHT4 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clip3B9EHT4 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clip3B9EHT4 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Clip3B9EHT4 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.34■□□□□ 0.69
Clip3B9EHT4 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Clip3B9EHT4 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Clip3B9EHT4 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.33■□□□□ 0.69
Clip3B9EHT4 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clip3B9EHT4 Gm27454-201ENSMUST00000185090 204 ntBASIC19.33■□□□□ 0.68
Clip3B9EHT4 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clip3B9EHT4 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clip3B9EHT4 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms