Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.36■□□□□ 0.21
Gm12887B1AVM1 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Gm12887B1AVM1 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm12887B1AVM1 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC16.36■□□□□ 0.21
Gm12887B1AVM1 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC16.36■□□□□ 0.21
Gm12887B1AVM1 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm12887B1AVM1 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.36■□□□□ 0.21
Gm12887B1AVM1 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm12887B1AVM1 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Gm12887B1AVM1 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Gm12887B1AVM1 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm12887B1AVM1 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm12887B1AVM1 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.35■□□□□ 0.21
Gm12887B1AVM1 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm12887B1AVM1 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm12887B1AVM1 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm12887B1AVM1 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm12887B1AVM1 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm12887B1AVM1 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm12887B1AVM1 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm12887B1AVM1 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.35■□□□□ 0.21
Gm12887B1AVM1 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm12887B1AVM1 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Gm12887B1AVM1 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Gm12887B1AVM1 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Gm12887B1AVM1 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm12887B1AVM1 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Gm12887B1AVM1 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Gm12887B1AVM1 AC151971.4-201ENSMUST00000214717 704 ntBASIC16.34■□□□□ 0.21
Gm12887B1AVM1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Gm12887B1AVM1 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm12887B1AVM1 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Gm12887B1AVM1 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm12887B1AVM1 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.34■□□□□ 0.21
Gm12887B1AVM1 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm12887B1AVM1 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm12887B1AVM1 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.33■□□□□ 0.21
Gm12887B1AVM1 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Gm12887B1AVM1 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
Gm12887B1AVM1 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
Gm12887B1AVM1 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm12887B1AVM1 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC16.33■□□□□ 0.2
Gm12887B1AVM1 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm12887B1AVM1 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm12887B1AVM1 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
Gm12887B1AVM1 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Gm12887B1AVM1 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm12887B1AVM1 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm12887B1AVM1 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm12887B1AVM1 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm12887B1AVM1 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm12887B1AVM1 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm12887B1AVM1 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.31■□□□□ 0.2
Gm12887B1AVM1 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm12887B1AVM1 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm12887B1AVM1 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm12887B1AVM1 Gm16437-201ENSMUST00000025669 507 ntBASIC16.31■□□□□ 0.2
Gm12887B1AVM1 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm12887B1AVM1 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Gm12887B1AVM1 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.31■□□□□ 0.2
Gm12887B1AVM1 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gm12887B1AVM1 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm12887B1AVM1 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Gm12887B1AVM1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gm12887B1AVM1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.31■□□□□ 0.2
Gm12887B1AVM1 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm12887B1AVM1 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gm12887B1AVM1 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gm12887B1AVM1 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm12887B1AVM1 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm12887B1AVM1 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm12887B1AVM1 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.3■□□□□ 0.2
Gm12887B1AVM1 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gm12887B1AVM1 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm12887B1AVM1 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm12887B1AVM1 Scarna2-201ENSMUST00000157560 414 ntBASIC16.3■□□□□ 0.2
Gm12887B1AVM1 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm12887B1AVM1 Gm9806-201ENSMUST00000051080 552 ntBASIC16.3■□□□□ 0.2
Gm12887B1AVM1 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm12887B1AVM1 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm12887B1AVM1 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.3■□□□□ 0.2
Gm12887B1AVM1 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm12887B1AVM1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gm12887B1AVM1 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Gm12887B1AVM1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Gm12887B1AVM1 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm12887B1AVM1 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm12887B1AVM1 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC16.29■□□□□ 0.2
Gm12887B1AVM1 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Gm12887B1AVM1 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Gm12887B1AVM1 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm12887B1AVM1 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Gm12887B1AVM1 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Gm12887B1AVM1 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC16.29■□□□□ 0.2
Gm12887B1AVM1 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Gm12887B1AVM1 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm12887B1AVM1 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm12887B1AVM1 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gm12887B1AVM1 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm12887B1AVM1 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms