Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Col6a5A6H584 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col6a5A6H584 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col6a5A6H584 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col6a5A6H584 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Col6a5A6H584 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col6a5A6H584 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col6a5A6H584 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Col6a5A6H584 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Col6a5A6H584 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC15.59■□□□□ 0.09
Col6a5A6H584 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Col6a5A6H584 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Col6a5A6H584 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col6a5A6H584 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col6a5A6H584 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col6a5A6H584 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col6a5A6H584 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Col6a5A6H584 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC15.58■□□□□ 0.08
Col6a5A6H584 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col6a5A6H584 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Col6a5A6H584 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col6a5A6H584 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Col6a5A6H584 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col6a5A6H584 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col6a5A6H584 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col6a5A6H584 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Col6a5A6H584 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.57■□□□□ 0.08
Col6a5A6H584 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Col6a5A6H584 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col6a5A6H584 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC15.57■□□□□ 0.08
Col6a5A6H584 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col6a5A6H584 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col6a5A6H584 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC15.57■□□□□ 0.08
Col6a5A6H584 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Col6a5A6H584 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col6a5A6H584 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col6a5A6H584 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Col6a5A6H584 Gm7290-201ENSMUST00000104990 617 ntBASIC15.56■□□□□ 0.08
Col6a5A6H584 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Col6a5A6H584 Gm15565-201ENSMUST00000118890 427 ntBASIC15.56■□□□□ 0.08
Col6a5A6H584 Gm12918-201ENSMUST00000120234 636 ntBASIC15.56■□□□□ 0.08
Col6a5A6H584 Gm15710-201ENSMUST00000121821 636 ntBASIC15.56■□□□□ 0.08
Col6a5A6H584 Gm5075-201ENSMUST00000196916 622 ntBASIC15.56■□□□□ 0.08
Col6a5A6H584 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC15.56■□□□□ 0.08
Col6a5A6H584 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC15.56■□□□□ 0.08
Col6a5A6H584 Gm6934-201ENSMUST00000194780 1905 ntBASIC15.56■□□□□ 0.08
Col6a5A6H584 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC15.56■□□□□ 0.08
Col6a5A6H584 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC15.56■□□□□ 0.08
Col6a5A6H584 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Col6a5A6H584 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col6a5A6H584 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col6a5A6H584 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC15.56■□□□□ 0.08
Col6a5A6H584 AC166356.1-201ENSMUST00000228236 1426 ntBASIC15.55■□□□□ 0.08
Col6a5A6H584 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC15.55■□□□□ 0.08
Col6a5A6H584 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col6a5A6H584 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC15.55■□□□□ 0.08
Col6a5A6H584 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC15.55■□□□□ 0.08
Col6a5A6H584 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Col6a5A6H584 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col6a5A6H584 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col6a5A6H584 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Col6a5A6H584 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Col6a5A6H584 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Col6a5A6H584 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Col6a5A6H584 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.54■□□□□ 0.08
Col6a5A6H584 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.54■□□□□ 0.08
Col6a5A6H584 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col6a5A6H584 Gm9988-201ENSMUST00000069786 435 ntBASIC15.54■□□□□ 0.08
Col6a5A6H584 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Col6a5A6H584 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC15.54■□□□□ 0.08
Col6a5A6H584 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col6a5A6H584 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col6a5A6H584 Gm6365-201ENSMUST00000054711 744 ntBASIC15.53■□□□□ 0.08
Col6a5A6H584 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col6a5A6H584 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col6a5A6H584 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col6a5A6H584 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col6a5A6H584 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC15.53■□□□□ 0.08
Col6a5A6H584 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col6a5A6H584 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Col6a5A6H584 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col6a5A6H584 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col6a5A6H584 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col6a5A6H584 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col6a5A6H584 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col6a5A6H584 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col6a5A6H584 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col6a5A6H584 Gm6211-202ENSMUST00000167849 925 ntBASIC15.52■□□□□ 0.08
Col6a5A6H584 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
Col6a5A6H584 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC15.52■□□□□ 0.08
Col6a5A6H584 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC15.52■□□□□ 0.08
Col6a5A6H584 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col6a5A6H584 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col6a5A6H584 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Col6a5A6H584 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.52■□□□□ 0.07
Col6a5A6H584 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Col6a5A6H584 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Col6a5A6H584 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col6a5A6H584 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC15.51■□□□□ 0.07
Col6a5A6H584 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms