Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC10.98□□□□□ -0.65
Ubr4A2AN08 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Ubr4A2AN08 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ubr4A2AN08 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC10.98□□□□□ -0.65
Ubr4A2AN08 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Ubr4A2AN08 AC153504.1-201ENSMUST00000218379 2290 ntBASIC10.97□□□□□ -0.65
Ubr4A2AN08 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Ubr4A2AN08 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ubr4A2AN08 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC10.97□□□□□ -0.65
Ubr4A2AN08 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC10.97□□□□□ -0.65
Ubr4A2AN08 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ubr4A2AN08 AC133598.3-202ENSMUST00000224219 531 ntBASIC10.97□□□□□ -0.65
Ubr4A2AN08 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ubr4A2AN08 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ubr4A2AN08 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC10.97□□□□□ -0.65
Ubr4A2AN08 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Ubr4A2AN08 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC10.97□□□□□ -0.65
Ubr4A2AN08 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ubr4A2AN08 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ubr4A2AN08 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC10.97□□□□□ -0.65
Ubr4A2AN08 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ubr4A2AN08 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ubr4A2AN08 Amer2-203ENSMUST00000225247 2662 ntBASIC10.96□□□□□ -0.65
Ubr4A2AN08 Gm27275-201ENSMUST00000184318 272 ntBASIC10.96□□□□□ -0.65
Ubr4A2AN08 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ubr4A2AN08 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Ubr4A2AN08 Gm14281-201ENSMUST00000121700 1294 ntBASIC10.96□□□□□ -0.65
Ubr4A2AN08 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ubr4A2AN08 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.65
Ubr4A2AN08 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Ubr4A2AN08 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ubr4A2AN08 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ubr4A2AN08 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ubr4A2AN08 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Ubr4A2AN08 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Ubr4A2AN08 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ubr4A2AN08 Gm11421-201ENSMUST00000122124 294 ntBASIC10.96□□□□□ -0.66
Ubr4A2AN08 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ubr4A2AN08 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Ubr4A2AN08 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ubr4A2AN08 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC10.95□□□□□ -0.66
Ubr4A2AN08 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ubr4A2AN08 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Ubr4A2AN08 Gm9988-201ENSMUST00000069786 435 ntBASIC10.95□□□□□ -0.66
Ubr4A2AN08 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ubr4A2AN08 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Ubr4A2AN08 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC10.95□□□□□ -0.66
Ubr4A2AN08 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC10.95□□□□□ -0.66
Ubr4A2AN08 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC10.95□□□□□ -0.66
Ubr4A2AN08 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC10.95□□□□□ -0.66
Ubr4A2AN08 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ubr4A2AN08 Gm6190-201ENSMUST00000220683 1374 ntBASIC10.95□□□□□ -0.66
Ubr4A2AN08 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ubr4A2AN08 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC10.94□□□□□ -0.66
Ubr4A2AN08 Gm10231-201ENSMUST00000181584 441 ntBASIC10.94□□□□□ -0.66
Ubr4A2AN08 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ubr4A2AN08 Gm10175-202ENSMUST00000208752 441 ntBASIC10.94□□□□□ -0.66
Ubr4A2AN08 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ubr4A2AN08 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ubr4A2AN08 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ubr4A2AN08 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ubr4A2AN08 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC10.94□□□□□ -0.66
Ubr4A2AN08 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ubr4A2AN08 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ubr4A2AN08 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ubr4A2AN08 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ubr4A2AN08 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC10.94□□□□□ -0.66
Ubr4A2AN08 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ubr4A2AN08 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ubr4A2AN08 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Ubr4A2AN08 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC10.94□□□□□ -0.66
Ubr4A2AN08 Gm4430-201ENSMUST00000192413 1943 ntBASIC10.94□□□□□ -0.66
Ubr4A2AN08 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ubr4A2AN08 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC10.93□□□□□ -0.66
Ubr4A2AN08 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ubr4A2AN08 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC10.93□□□□□ -0.66
Ubr4A2AN08 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC10.93□□□□□ -0.66
Ubr4A2AN08 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ubr4A2AN08 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC10.93□□□□□ -0.66
Ubr4A2AN08 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ubr4A2AN08 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ubr4A2AN08 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Ubr4A2AN08 Gm11249-201ENSMUST00000117071 859 ntBASIC10.93□□□□□ -0.66
Ubr4A2AN08 Gm6433-201ENSMUST00000118634 875 ntBASIC10.93□□□□□ -0.66
Ubr4A2AN08 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ubr4A2AN08 Gm43799-201ENSMUST00000201845 579 ntBASIC10.93□□□□□ -0.66
Ubr4A2AN08 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ubr4A2AN08 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ubr4A2AN08 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC10.92□□□□□ -0.66
Ubr4A2AN08 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ubr4A2AN08 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ubr4A2AN08 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Ubr4A2AN08 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ubr4A2AN08 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ubr4A2AN08 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ubr4A2AN08 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC10.92□□□□□ -0.66
Ubr4A2AN08 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC10.92□□□□□ -0.66
Ubr4A2AN08 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ubr4A2AN08 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ubr4A2AN08 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms