Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
IsxA1A546 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
IsxA1A546 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IsxA1A546 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IsxA1A546 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IsxA1A546 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
IsxA1A546 Cap2-205ENSMUST00000225824 1634 ntBASIC18.75■□□□□ 0.59
IsxA1A546 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IsxA1A546 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IsxA1A546 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
IsxA1A546 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
IsxA1A546 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
IsxA1A546 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
IsxA1A546 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IsxA1A546 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IsxA1A546 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IsxA1A546 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IsxA1A546 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
IsxA1A546 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
IsxA1A546 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
IsxA1A546 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IsxA1A546 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
IsxA1A546 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.73■□□□□ 0.59
IsxA1A546 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
IsxA1A546 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.73■□□□□ 0.59
IsxA1A546 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
IsxA1A546 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
IsxA1A546 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
IsxA1A546 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
IsxA1A546 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
IsxA1A546 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
IsxA1A546 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
IsxA1A546 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
IsxA1A546 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
IsxA1A546 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
IsxA1A546 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
IsxA1A546 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.72■□□□□ 0.59
IsxA1A546 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
IsxA1A546 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
IsxA1A546 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
IsxA1A546 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
IsxA1A546 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.71■□□□□ 0.59
IsxA1A546 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
IsxA1A546 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
IsxA1A546 Gm16437-201ENSMUST00000025669 507 ntBASIC18.71■□□□□ 0.59
IsxA1A546 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
IsxA1A546 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
IsxA1A546 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IsxA1A546 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IsxA1A546 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IsxA1A546 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IsxA1A546 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IsxA1A546 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
IsxA1A546 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IsxA1A546 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IsxA1A546 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
IsxA1A546 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IsxA1A546 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.69■□□□□ 0.58
IsxA1A546 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.69■□□□□ 0.58
IsxA1A546 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
IsxA1A546 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
IsxA1A546 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.69■□□□□ 0.58
IsxA1A546 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IsxA1A546 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IsxA1A546 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IsxA1A546 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
IsxA1A546 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IsxA1A546 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
IsxA1A546 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IsxA1A546 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
IsxA1A546 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
IsxA1A546 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.68■□□□□ 0.58
IsxA1A546 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
IsxA1A546 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.68■□□□□ 0.58
IsxA1A546 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
IsxA1A546 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IsxA1A546 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IsxA1A546 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
IsxA1A546 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IsxA1A546 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
IsxA1A546 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IsxA1A546 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IsxA1A546 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
IsxA1A546 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
IsxA1A546 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
IsxA1A546 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IsxA1A546 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
IsxA1A546 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
IsxA1A546 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.66■□□□□ 0.58
IsxA1A546 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
IsxA1A546 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IsxA1A546 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IsxA1A546 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
IsxA1A546 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
IsxA1A546 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IsxA1A546 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IsxA1A546 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
IsxA1A546 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
IsxA1A546 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
IsxA1A546 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms