Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smim17A0A504 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smim17A0A504 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smim17A0A504 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smim17A0A504 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Smim17A0A504 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smim17A0A504 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smim17A0A504 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smim17A0A504 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Smim17A0A504 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smim17A0A504 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smim17A0A504 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smim17A0A504 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smim17A0A504 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.28■□□□□ 0.52
Smim17A0A504 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smim17A0A504 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Smim17A0A504 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.28■□□□□ 0.52
Smim17A0A504 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smim17A0A504 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smim17A0A504 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smim17A0A504 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smim17A0A504 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smim17A0A504 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smim17A0A504 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.27■□□□□ 0.52
Smim17A0A504 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smim17A0A504 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smim17A0A504 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.27■□□□□ 0.51
Smim17A0A504 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smim17A0A504 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smim17A0A504 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Smim17A0A504 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smim17A0A504 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smim17A0A504 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smim17A0A504 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smim17A0A504 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smim17A0A504 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Smim17A0A504 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smim17A0A504 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smim17A0A504 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Smim17A0A504 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smim17A0A504 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smim17A0A504 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Smim17A0A504 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smim17A0A504 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smim17A0A504 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smim17A0A504 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smim17A0A504 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smim17A0A504 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.25■□□□□ 0.51
Smim17A0A504 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smim17A0A504 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smim17A0A504 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smim17A0A504 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smim17A0A504 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smim17A0A504 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smim17A0A504 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.24■□□□□ 0.51
Smim17A0A504 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.24■□□□□ 0.51
Smim17A0A504 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smim17A0A504 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smim17A0A504 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smim17A0A504 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smim17A0A504 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smim17A0A504 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smim17A0A504 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smim17A0A504 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Smim17A0A504 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smim17A0A504 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Smim17A0A504 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smim17A0A504 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.23■□□□□ 0.51
Smim17A0A504 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Smim17A0A504 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smim17A0A504 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smim17A0A504 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Smim17A0A504 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smim17A0A504 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smim17A0A504 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.22■□□□□ 0.51
Smim17A0A504 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smim17A0A504 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smim17A0A504 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.21■□□□□ 0.51
Smim17A0A504 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Smim17A0A504 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Smim17A0A504 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smim17A0A504 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smim17A0A504 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Smim17A0A504 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smim17A0A504 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smim17A0A504 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.21■□□□□ 0.51
Smim17A0A504 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smim17A0A504 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smim17A0A504 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smim17A0A504 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smim17A0A504 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smim17A0A504 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Smim17A0A504 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.2■□□□□ 0.5
Smim17A0A504 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Smim17A0A504 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smim17A0A504 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smim17A0A504 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smim17A0A504 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Smim17A0A504 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Smim17A0A504 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms