Protein–RNA interactions for Protein: A0A1W2P7H6

Mindy4b-ps, MINDY lysine 48 deubiquitinase 4B, pseudogene, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mindy4b-psA0A1W2P7H6 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Mindy4b-psA0A1W2P7H6 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Mindy4b-psA0A1W2P7H6 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Mindy4b-psA0A1W2P7H6 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Mindy4b-psA0A1W2P7H6 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Mindy4b-psA0A1W2P7H6 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Mindy4b-psA0A1W2P7H6 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Mindy4b-psA0A1W2P7H6 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Mindy4b-psA0A1W2P7H6 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.41■■□□□ 1.02
Mindy4b-psA0A1W2P7H6 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Mindy4b-psA0A1W2P7H6 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Mindy4b-psA0A1W2P7H6 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Mindy4b-psA0A1W2P7H6 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Mindy4b-psA0A1W2P7H6 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Mindy4b-psA0A1W2P7H6 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Mindy4b-psA0A1W2P7H6 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.4■■□□□ 1.02
Mindy4b-psA0A1W2P7H6 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Mindy4b-psA0A1W2P7H6 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Mindy4b-psA0A1W2P7H6 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Mindy4b-psA0A1W2P7H6 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Mindy4b-psA0A1W2P7H6 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Mindy4b-psA0A1W2P7H6 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Mindy4b-psA0A1W2P7H6 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Mindy4b-psA0A1W2P7H6 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.39■■□□□ 1.02
Mindy4b-psA0A1W2P7H6 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Mindy4b-psA0A1W2P7H6 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.39■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.38■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.38■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.38■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Gm27454-201ENSMUST00000185090 204 ntBASIC21.38■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.38■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.38■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.37■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.36■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.35■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.35■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.35■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Gm43137-201ENSMUST00000198052 594 ntBASIC21.34■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.33■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Mindy4b-psA0A1W2P7H6 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Mindy4b-psA0A1W2P7H6 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Mindy4b-psA0A1W2P7H6 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.33■■□□□ 1
Mindy4b-psA0A1W2P7H6 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Mindy4b-psA0A1W2P7H6 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Mindy4b-psA0A1W2P7H6 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.32■■□□□ 1
Mindy4b-psA0A1W2P7H6 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Mindy4b-psA0A1W2P7H6 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Mindy4b-psA0A1W2P7H6 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Mindy4b-psA0A1W2P7H6 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Mindy4b-psA0A1W2P7H6 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Mindy4b-psA0A1W2P7H6 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.31■■□□□ 1
Mindy4b-psA0A1W2P7H6 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Mindy4b-psA0A1W2P7H6 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Mindy4b-psA0A1W2P7H6 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Mindy4b-psA0A1W2P7H6 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.3■■□□□ 1
Mindy4b-psA0A1W2P7H6 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms