Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm3854A0A1B0GSS6 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm3854A0A1B0GSS6 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.34■□□□□ 0.85
Gm3854A0A1B0GSS6 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
Gm3854A0A1B0GSS6 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gm3854A0A1B0GSS6 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Gm3854A0A1B0GSS6 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Gm3854A0A1B0GSS6 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gm3854A0A1B0GSS6 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
Gm3854A0A1B0GSS6 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.33■□□□□ 0.85
Gm3854A0A1B0GSS6 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gm3854A0A1B0GSS6 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.33■□□□□ 0.84
Gm3854A0A1B0GSS6 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Gm3854A0A1B0GSS6 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gm3854A0A1B0GSS6 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gm3854A0A1B0GSS6 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.33■□□□□ 0.84
Gm3854A0A1B0GSS6 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm3854A0A1B0GSS6 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm3854A0A1B0GSS6 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm3854A0A1B0GSS6 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm3854A0A1B0GSS6 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Gm3854A0A1B0GSS6 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm3854A0A1B0GSS6 Gm27405-201ENSMUST00000184201 112 ntBASIC20.32■□□□□ 0.84
Gm3854A0A1B0GSS6 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.32■□□□□ 0.84
Gm3854A0A1B0GSS6 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Gm3854A0A1B0GSS6 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.32■□□□□ 0.84
Gm3854A0A1B0GSS6 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm3854A0A1B0GSS6 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm3854A0A1B0GSS6 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.31■□□□□ 0.84
Gm3854A0A1B0GSS6 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Gm3854A0A1B0GSS6 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Gm3854A0A1B0GSS6 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm3854A0A1B0GSS6 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm3854A0A1B0GSS6 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Gm3854A0A1B0GSS6 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm3854A0A1B0GSS6 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Gm3854A0A1B0GSS6 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.31■□□□□ 0.84
Gm3854A0A1B0GSS6 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.3■□□□□ 0.84
Gm3854A0A1B0GSS6 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.3■□□□□ 0.84
Gm3854A0A1B0GSS6 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm3854A0A1B0GSS6 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.3■□□□□ 0.84
Gm3854A0A1B0GSS6 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.3■□□□□ 0.84
Gm3854A0A1B0GSS6 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm3854A0A1B0GSS6 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.3■□□□□ 0.84
Gm3854A0A1B0GSS6 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.3■□□□□ 0.84
Gm3854A0A1B0GSS6 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.3■□□□□ 0.84
Gm3854A0A1B0GSS6 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm3854A0A1B0GSS6 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.3■□□□□ 0.84
Gm3854A0A1B0GSS6 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm3854A0A1B0GSS6 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm3854A0A1B0GSS6 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Gm3854A0A1B0GSS6 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Gm3854A0A1B0GSS6 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Gm3854A0A1B0GSS6 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Gm3854A0A1B0GSS6 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm3854A0A1B0GSS6 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm3854A0A1B0GSS6 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm3854A0A1B0GSS6 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm3854A0A1B0GSS6 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm3854A0A1B0GSS6 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Gm3854A0A1B0GSS6 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.28■□□□□ 0.84
Gm3854A0A1B0GSS6 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gm3854A0A1B0GSS6 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.28■□□□□ 0.84
Gm3854A0A1B0GSS6 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gm3854A0A1B0GSS6 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm3854A0A1B0GSS6 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm3854A0A1B0GSS6 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm3854A0A1B0GSS6 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm3854A0A1B0GSS6 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Gm3854A0A1B0GSS6 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm3854A0A1B0GSS6 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.27■□□□□ 0.84
Gm3854A0A1B0GSS6 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Gm3854A0A1B0GSS6 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Gm3854A0A1B0GSS6 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Gm3854A0A1B0GSS6 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Gm3854A0A1B0GSS6 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm3854A0A1B0GSS6 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Gm3854A0A1B0GSS6 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.26■□□□□ 0.83
Gm3854A0A1B0GSS6 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.26■□□□□ 0.83
Gm3854A0A1B0GSS6 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Gm3854A0A1B0GSS6 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm3854A0A1B0GSS6 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.25■□□□□ 0.83
Gm3854A0A1B0GSS6 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm3854A0A1B0GSS6 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Gm3854A0A1B0GSS6 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Gm3854A0A1B0GSS6 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Gm3854A0A1B0GSS6 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm3854A0A1B0GSS6 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Gm3854A0A1B0GSS6 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.24■□□□□ 0.83
Gm3854A0A1B0GSS6 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Gm3854A0A1B0GSS6 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm3854A0A1B0GSS6 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm3854A0A1B0GSS6 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm3854A0A1B0GSS6 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.24■□□□□ 0.83
Gm3854A0A1B0GSS6 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.24■□□□□ 0.83
Gm3854A0A1B0GSS6 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm3854A0A1B0GSS6 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm3854A0A1B0GSS6 Gm18671-201ENSMUST00000214826 683 ntBASIC20.24■□□□□ 0.83
Gm3854A0A1B0GSS6 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.24■□□□□ 0.83
Gm3854A0A1B0GSS6 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms