Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Cfap99A0A140LIX9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Cfap99A0A140LIX9 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Cfap99A0A140LIX9 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC24.16■■□□□ 1.46
Cfap99A0A140LIX9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Cfap99A0A140LIX9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Cfap99A0A140LIX9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
Cfap99A0A140LIX9 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Cfap99A0A140LIX9 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Cfap99A0A140LIX9 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC24.15■■□□□ 1.46
Cfap99A0A140LIX9 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Cfap99A0A140LIX9 Krt8-ps-201ENSMUST00000208495 945 ntBASIC24.15■■□□□ 1.46
Cfap99A0A140LIX9 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Cfap99A0A140LIX9 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
Cfap99A0A140LIX9 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC24.14■■□□□ 1.45
Cfap99A0A140LIX9 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Cfap99A0A140LIX9 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Cfap99A0A140LIX9 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Cfap99A0A140LIX9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Cfap99A0A140LIX9 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
Cfap99A0A140LIX9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Cfap99A0A140LIX9 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Cfap99A0A140LIX9 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Cfap99A0A140LIX9 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Cfap99A0A140LIX9 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC24.13■■□□□ 1.45
Cfap99A0A140LIX9 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Cfap99A0A140LIX9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC24.13■■□□□ 1.45
Cfap99A0A140LIX9 Gm43017-201ENSMUST00000198296 752 ntBASIC24.13■■□□□ 1.45
Cfap99A0A140LIX9 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC24.13■■□□□ 1.45
Cfap99A0A140LIX9 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Cfap99A0A140LIX9 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Cfap99A0A140LIX9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
Cfap99A0A140LIX9 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Cfap99A0A140LIX9 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Cfap99A0A140LIX9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Cfap99A0A140LIX9 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Cfap99A0A140LIX9 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
Cfap99A0A140LIX9 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Cfap99A0A140LIX9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
Cfap99A0A140LIX9 Kdm3b-204ENSMUST00000224715 2032 ntBASIC24.11■■□□□ 1.45
Cfap99A0A140LIX9 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
Cfap99A0A140LIX9 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Cfap99A0A140LIX9 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Cfap99A0A140LIX9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Cfap99A0A140LIX9 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC24.1■■□□□ 1.45
Cfap99A0A140LIX9 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC24.1■■□□□ 1.45
Cfap99A0A140LIX9 Gm8493-201ENSMUST00000196881 489 ntBASIC24.1■■□□□ 1.45
Cfap99A0A140LIX9 Gm44949-201ENSMUST00000206423 1450 ntBASIC24.1■■□□□ 1.45
Cfap99A0A140LIX9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Cfap99A0A140LIX9 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Cfap99A0A140LIX9 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Cfap99A0A140LIX9 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Cfap99A0A140LIX9 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Cfap99A0A140LIX9 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
Cfap99A0A140LIX9 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Cfap99A0A140LIX9 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
Cfap99A0A140LIX9 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC24.09■■□□□ 1.45
Cfap99A0A140LIX9 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Cfap99A0A140LIX9 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC24.09■■□□□ 1.45
Cfap99A0A140LIX9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC24.09■■□□□ 1.45
Cfap99A0A140LIX9 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC24.09■■□□□ 1.45
Cfap99A0A140LIX9 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
Cfap99A0A140LIX9 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Cfap99A0A140LIX9 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Cfap99A0A140LIX9 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Cfap99A0A140LIX9 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Cfap99A0A140LIX9 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Cfap99A0A140LIX9 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Cfap99A0A140LIX9 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Cfap99A0A140LIX9 Gm10657-201ENSMUST00000193528 1031 ntBASIC24.08■■□□□ 1.45
Cfap99A0A140LIX9 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC24.08■■□□□ 1.45
Cfap99A0A140LIX9 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Cfap99A0A140LIX9 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Cfap99A0A140LIX9 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Cfap99A0A140LIX9 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Cfap99A0A140LIX9 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Cfap99A0A140LIX9 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC24.07■■□□□ 1.44
Cfap99A0A140LIX9 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Cfap99A0A140LIX9 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Cfap99A0A140LIX9 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Cfap99A0A140LIX9 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Cfap99A0A140LIX9 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Cfap99A0A140LIX9 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Cfap99A0A140LIX9 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Cfap99A0A140LIX9 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Cfap99A0A140LIX9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Cfap99A0A140LIX9 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Cfap99A0A140LIX9 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
Cfap99A0A140LIX9 Gm43006-201ENSMUST00000197702 1602 ntBASIC24.06■■□□□ 1.44
Cfap99A0A140LIX9 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC24.06■■□□□ 1.44
Cfap99A0A140LIX9 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
Cfap99A0A140LIX9 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC24.06■■□□□ 1.44
Cfap99A0A140LIX9 Gm5576-201ENSMUST00000075809 1236 ntBASIC24.06■■□□□ 1.44
Cfap99A0A140LIX9 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
Cfap99A0A140LIX9 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC24.06■■□□□ 1.44
Cfap99A0A140LIX9 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Cfap99A0A140LIX9 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Cfap99A0A140LIX9 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Cfap99A0A140LIX9 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Cfap99A0A140LIX9 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms