Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Ccdc194A0A140LIT1 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ccdc194A0A140LIT1 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ccdc194A0A140LIT1 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.08■□□□□ 0.81
Ccdc194A0A140LIT1 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Ccdc194A0A140LIT1 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ccdc194A0A140LIT1 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Ccdc194A0A140LIT1 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ccdc194A0A140LIT1 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.08■□□□□ 0.81
Ccdc194A0A140LIT1 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Ccdc194A0A140LIT1 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ccdc194A0A140LIT1 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ccdc194A0A140LIT1 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Ccdc194A0A140LIT1 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ccdc194A0A140LIT1 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc194A0A140LIT1 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc194A0A140LIT1 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
Ccdc194A0A140LIT1 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.07■□□□□ 0.8
Ccdc194A0A140LIT1 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc194A0A140LIT1 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.07■□□□□ 0.8
Ccdc194A0A140LIT1 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.07■□□□□ 0.8
Ccdc194A0A140LIT1 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.07■□□□□ 0.8
Ccdc194A0A140LIT1 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc194A0A140LIT1 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc194A0A140LIT1 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc194A0A140LIT1 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc194A0A140LIT1 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Ccdc194A0A140LIT1 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.06■□□□□ 0.8
Ccdc194A0A140LIT1 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc194A0A140LIT1 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc194A0A140LIT1 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.06■□□□□ 0.8
Ccdc194A0A140LIT1 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc194A0A140LIT1 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc194A0A140LIT1 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc194A0A140LIT1 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.06■□□□□ 0.8
Ccdc194A0A140LIT1 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc194A0A140LIT1 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc194A0A140LIT1 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc194A0A140LIT1 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Ccdc194A0A140LIT1 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc194A0A140LIT1 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc194A0A140LIT1 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc194A0A140LIT1 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Ccdc194A0A140LIT1 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Ccdc194A0A140LIT1 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc194A0A140LIT1 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Ccdc194A0A140LIT1 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Ccdc194A0A140LIT1 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc194A0A140LIT1 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc194A0A140LIT1 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc194A0A140LIT1 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc194A0A140LIT1 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.04■□□□□ 0.8
Ccdc194A0A140LIT1 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc194A0A140LIT1 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc194A0A140LIT1 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc194A0A140LIT1 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
Ccdc194A0A140LIT1 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Ccdc194A0A140LIT1 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Ccdc194A0A140LIT1 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc194A0A140LIT1 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc194A0A140LIT1 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc194A0A140LIT1 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc194A0A140LIT1 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc194A0A140LIT1 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Ccdc194A0A140LIT1 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Ccdc194A0A140LIT1 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc194A0A140LIT1 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc194A0A140LIT1 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc194A0A140LIT1 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc194A0A140LIT1 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc194A0A140LIT1 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc194A0A140LIT1 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.02■□□□□ 0.8
Ccdc194A0A140LIT1 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc194A0A140LIT1 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ccdc194A0A140LIT1 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ccdc194A0A140LIT1 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ccdc194A0A140LIT1 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.02■□□□□ 0.79
Ccdc194A0A140LIT1 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ccdc194A0A140LIT1 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc194A0A140LIT1 Notumos-201ENSMUST00000151998 2659 ntBASIC20.01■□□□□ 0.79
Ccdc194A0A140LIT1 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Ccdc194A0A140LIT1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc194A0A140LIT1 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc194A0A140LIT1 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc194A0A140LIT1 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc194A0A140LIT1 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.01■□□□□ 0.79
Ccdc194A0A140LIT1 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
Ccdc194A0A140LIT1 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc194A0A140LIT1 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ccdc194A0A140LIT1 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ccdc194A0A140LIT1 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc194A0A140LIT1 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20■□□□□ 0.79
Ccdc194A0A140LIT1 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20■□□□□ 0.79
Ccdc194A0A140LIT1 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Ccdc194A0A140LIT1 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc194A0A140LIT1 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20■□□□□ 0.79
Ccdc194A0A140LIT1 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc194A0A140LIT1 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc194A0A140LIT1 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc194A0A140LIT1 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms