Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv29A0A0G2LB96 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv29A0A0G2LB96 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.81■□□□□ 0.28
Trbv29A0A0G2LB96 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC16.81■□□□□ 0.28
Trbv29A0A0G2LB96 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv29A0A0G2LB96 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trbv29A0A0G2LB96 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv29A0A0G2LB96 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv29A0A0G2LB96 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv29A0A0G2LB96 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Trbv29A0A0G2LB96 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv29A0A0G2LB96 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC16.81■□□□□ 0.28
Trbv29A0A0G2LB96 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv29A0A0G2LB96 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv29A0A0G2LB96 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv29A0A0G2LB96 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv29A0A0G2LB96 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv29A0A0G2LB96 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv29A0A0G2LB96 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv29A0A0G2LB96 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv29A0A0G2LB96 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv29A0A0G2LB96 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC16.8■□□□□ 0.28
Trbv29A0A0G2LB96 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv29A0A0G2LB96 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv29A0A0G2LB96 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv29A0A0G2LB96 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv29A0A0G2LB96 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv29A0A0G2LB96 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv29A0A0G2LB96 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.79■□□□□ 0.28
Trbv29A0A0G2LB96 Golph3-202ENSMUST00000226517 2359 ntBASIC16.79■□□□□ 0.28
Trbv29A0A0G2LB96 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv29A0A0G2LB96 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv29A0A0G2LB96 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv29A0A0G2LB96 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv29A0A0G2LB96 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv29A0A0G2LB96 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv29A0A0G2LB96 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv29A0A0G2LB96 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv29A0A0G2LB96 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Trbv29A0A0G2LB96 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.78■□□□□ 0.28
Trbv29A0A0G2LB96 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv29A0A0G2LB96 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv29A0A0G2LB96 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC16.78■□□□□ 0.28
Trbv29A0A0G2LB96 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trbv29A0A0G2LB96 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv29A0A0G2LB96 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC16.78■□□□□ 0.28
Trbv29A0A0G2LB96 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv29A0A0G2LB96 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trbv29A0A0G2LB96 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trbv29A0A0G2LB96 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC16.77■□□□□ 0.28
Trbv29A0A0G2LB96 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trbv29A0A0G2LB96 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv29A0A0G2LB96 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv29A0A0G2LB96 Gm16464-201ENSMUST00000117815 1095 ntBASIC16.76■□□□□ 0.27
Trbv29A0A0G2LB96 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv29A0A0G2LB96 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv29A0A0G2LB96 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Trbv29A0A0G2LB96 Nsd1-203ENSMUST00000224156 1149 ntBASIC16.76■□□□□ 0.27
Trbv29A0A0G2LB96 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv29A0A0G2LB96 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.75■□□□□ 0.27
Trbv29A0A0G2LB96 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv29A0A0G2LB96 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trbv29A0A0G2LB96 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv29A0A0G2LB96 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv29A0A0G2LB96 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv29A0A0G2LB96 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Trbv29A0A0G2LB96 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv29A0A0G2LB96 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv29A0A0G2LB96 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv29A0A0G2LB96 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv29A0A0G2LB96 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.75■□□□□ 0.27
Trbv29A0A0G2LB96 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Trbv29A0A0G2LB96 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv29A0A0G2LB96 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Trbv29A0A0G2LB96 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.74■□□□□ 0.27
Trbv29A0A0G2LB96 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv29A0A0G2LB96 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv29A0A0G2LB96 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.74■□□□□ 0.27
Trbv29A0A0G2LB96 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.74■□□□□ 0.27
Trbv29A0A0G2LB96 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv29A0A0G2LB96 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv29A0A0G2LB96 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC16.74■□□□□ 0.27
Trbv29A0A0G2LB96 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv29A0A0G2LB96 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv29A0A0G2LB96 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv29A0A0G2LB96 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv29A0A0G2LB96 Gm45444-201ENSMUST00000211394 898 ntBASIC16.73■□□□□ 0.27
Trbv29A0A0G2LB96 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv29A0A0G2LB96 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Trbv29A0A0G2LB96 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv29A0A0G2LB96 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv29A0A0G2LB96 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Trbv29A0A0G2LB96 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv29A0A0G2LB96 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv29A0A0G2LB96 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv29A0A0G2LB96 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.72■□□□□ 0.27
Trbv29A0A0G2LB96 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv29A0A0G2LB96 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Trbv29A0A0G2LB96 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv29A0A0G2LB96 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms