Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav9d-4A0A0G2JG37 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav9d-4A0A0G2JG37 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav9d-4A0A0G2JG37 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC13.83□□□□□ -0.2
Trav9d-4A0A0G2JG37 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav9d-4A0A0G2JG37 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav9d-4A0A0G2JG37 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav9d-4A0A0G2JG37 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav9d-4A0A0G2JG37 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Trav9d-4A0A0G2JG37 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav9d-4A0A0G2JG37 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav9d-4A0A0G2JG37 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav9d-4A0A0G2JG37 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav9d-4A0A0G2JG37 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav9d-4A0A0G2JG37 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav9d-4A0A0G2JG37 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav9d-4A0A0G2JG37 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav9d-4A0A0G2JG37 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trav9d-4A0A0G2JG37 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trav9d-4A0A0G2JG37 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav9d-4A0A0G2JG37 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav9d-4A0A0G2JG37 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC13.82□□□□□ -0.2
Trav9d-4A0A0G2JG37 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trav9d-4A0A0G2JG37 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav9d-4A0A0G2JG37 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav9d-4A0A0G2JG37 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav9d-4A0A0G2JG37 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav9d-4A0A0G2JG37 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav9d-4A0A0G2JG37 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC13.82□□□□□ -0.2
Trav9d-4A0A0G2JG37 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Trav9d-4A0A0G2JG37 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav9d-4A0A0G2JG37 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav9d-4A0A0G2JG37 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav9d-4A0A0G2JG37 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trav9d-4A0A0G2JG37 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav9d-4A0A0G2JG37 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC13.81□□□□□ -0.2
Trav9d-4A0A0G2JG37 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav9d-4A0A0G2JG37 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav9d-4A0A0G2JG37 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav9d-4A0A0G2JG37 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav9d-4A0A0G2JG37 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav9d-4A0A0G2JG37 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trav9d-4A0A0G2JG37 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav9d-4A0A0G2JG37 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav9d-4A0A0G2JG37 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav9d-4A0A0G2JG37 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav9d-4A0A0G2JG37 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav9d-4A0A0G2JG37 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav9d-4A0A0G2JG37 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav9d-4A0A0G2JG37 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trav9d-4A0A0G2JG37 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav9d-4A0A0G2JG37 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC13.8□□□□□ -0.2
Trav9d-4A0A0G2JG37 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trav9d-4A0A0G2JG37 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav9d-4A0A0G2JG37 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav9d-4A0A0G2JG37 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav9d-4A0A0G2JG37 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trav9d-4A0A0G2JG37 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav9d-4A0A0G2JG37 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav9d-4A0A0G2JG37 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav9d-4A0A0G2JG37 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav9d-4A0A0G2JG37 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trav9d-4A0A0G2JG37 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav9d-4A0A0G2JG37 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav9d-4A0A0G2JG37 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Trav9d-4A0A0G2JG37 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav9d-4A0A0G2JG37 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav9d-4A0A0G2JG37 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trav9d-4A0A0G2JG37 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav9d-4A0A0G2JG37 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav9d-4A0A0G2JG37 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav9d-4A0A0G2JG37 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav9d-4A0A0G2JG37 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav9d-4A0A0G2JG37 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav9d-4A0A0G2JG37 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav9d-4A0A0G2JG37 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav9d-4A0A0G2JG37 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trav9d-4A0A0G2JG37 AC152827.1-201ENSMUST00000221143 2189 ntBASIC13.78□□□□□ -0.2
Trav9d-4A0A0G2JG37 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav9d-4A0A0G2JG37 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC13.78□□□□□ -0.2
Trav9d-4A0A0G2JG37 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav9d-4A0A0G2JG37 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav9d-4A0A0G2JG37 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav9d-4A0A0G2JG37 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav9d-4A0A0G2JG37 Gm9806-201ENSMUST00000051080 552 ntBASIC13.78□□□□□ -0.2
Trav9d-4A0A0G2JG37 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav9d-4A0A0G2JG37 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav9d-4A0A0G2JG37 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav9d-4A0A0G2JG37 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav9d-4A0A0G2JG37 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav9d-4A0A0G2JG37 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav9d-4A0A0G2JG37 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav9d-4A0A0G2JG37 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC13.77□□□□□ -0.21
Trav9d-4A0A0G2JG37 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Trav9d-4A0A0G2JG37 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trav9d-4A0A0G2JG37 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav9d-4A0A0G2JG37 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Trav9d-4A0A0G2JG37 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav9d-4A0A0G2JG37 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav9d-4A0A0G2JG37 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms