Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav3n-3A0A0G2JEM0 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.18■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Scarna2-201ENSMUST00000157560 414 ntBASIC15.18■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Gm11687-201ENSMUST00000118911 886 ntBASIC15.17■□□□□ 0.02
Trav3n-3A0A0G2JEM0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC15.17■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav3n-3A0A0G2JEM0 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC15.16■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav3n-3A0A0G2JEM0 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav3n-3A0A0G2JEM0 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC15.15■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Gm16437-201ENSMUST00000025669 507 ntBASIC15.15■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC15.14■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Hsf1-204ENSMUST00000226872 2104 ntBASIC15.13■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC15.13■□□□□ 0.01
Trav3n-3A0A0G2JEM0 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.13■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav3n-3A0A0G2JEM0 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms