Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv12-1A0A0B4J1H0 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
Trbv12-1A0A0B4J1H0 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv12-1A0A0B4J1H0 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv12-1A0A0B4J1H0 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv12-1A0A0B4J1H0 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv12-1A0A0B4J1H0 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv12-1A0A0B4J1H0 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.96■□□□□ 0.47
Trbv12-1A0A0B4J1H0 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.96■□□□□ 0.47
Trbv12-1A0A0B4J1H0 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Trbv12-1A0A0B4J1H0 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv12-1A0A0B4J1H0 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv12-1A0A0B4J1H0 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv12-1A0A0B4J1H0 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv12-1A0A0B4J1H0 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.95■□□□□ 0.46
Trbv12-1A0A0B4J1H0 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv12-1A0A0B4J1H0 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv12-1A0A0B4J1H0 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv12-1A0A0B4J1H0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv12-1A0A0B4J1H0 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv12-1A0A0B4J1H0 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv12-1A0A0B4J1H0 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv12-1A0A0B4J1H0 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv12-1A0A0B4J1H0 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
Trbv12-1A0A0B4J1H0 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv12-1A0A0B4J1H0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv12-1A0A0B4J1H0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv12-1A0A0B4J1H0 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv12-1A0A0B4J1H0 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv12-1A0A0B4J1H0 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv12-1A0A0B4J1H0 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.93■□□□□ 0.46
Trbv12-1A0A0B4J1H0 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Trbv12-1A0A0B4J1H0 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Trbv12-1A0A0B4J1H0 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv12-1A0A0B4J1H0 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.92■□□□□ 0.46
Trbv12-1A0A0B4J1H0 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv12-1A0A0B4J1H0 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv12-1A0A0B4J1H0 Gm13241-201ENSMUST00000094493 780 ntBASIC17.92■□□□□ 0.46
Trbv12-1A0A0B4J1H0 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trbv12-1A0A0B4J1H0 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv12-1A0A0B4J1H0 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv12-1A0A0B4J1H0 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv12-1A0A0B4J1H0 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.92■□□□□ 0.46
Trbv12-1A0A0B4J1H0 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv12-1A0A0B4J1H0 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv12-1A0A0B4J1H0 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv12-1A0A0B4J1H0 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.91■□□□□ 0.46
Trbv12-1A0A0B4J1H0 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv12-1A0A0B4J1H0 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv12-1A0A0B4J1H0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Trbv12-1A0A0B4J1H0 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv12-1A0A0B4J1H0 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.9■□□□□ 0.46
Trbv12-1A0A0B4J1H0 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv12-1A0A0B4J1H0 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv12-1A0A0B4J1H0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv12-1A0A0B4J1H0 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv12-1A0A0B4J1H0 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv12-1A0A0B4J1H0 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv12-1A0A0B4J1H0 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.9■□□□□ 0.46
Trbv12-1A0A0B4J1H0 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Trbv12-1A0A0B4J1H0 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trbv12-1A0A0B4J1H0 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Trbv12-1A0A0B4J1H0 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.89■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv12-1A0A0B4J1H0 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.89■□□□□ 0.45
Trbv12-1A0A0B4J1H0 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.89■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.88■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.88■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.87■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.87■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.86■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.86■□□□□ 0.45
Trbv12-1A0A0B4J1H0 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv12-1A0A0B4J1H0 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms