Protein–RNA interactions for Protein: A0A0B4J1G8

Trbv2, T cell receptor beta, variable 2 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv2A0A0B4J1G8 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv2A0A0B4J1G8 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv2A0A0B4J1G8 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv2A0A0B4J1G8 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv2A0A0B4J1G8 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.97■□□□□ 0.47
Trbv2A0A0B4J1G8 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv2A0A0B4J1G8 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv2A0A0B4J1G8 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv2A0A0B4J1G8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv2A0A0B4J1G8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv2A0A0B4J1G8 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv2A0A0B4J1G8 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Trbv2A0A0B4J1G8 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Trbv2A0A0B4J1G8 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.96■□□□□ 0.47
Trbv2A0A0B4J1G8 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Trbv2A0A0B4J1G8 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Trbv2A0A0B4J1G8 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trbv2A0A0B4J1G8 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv2A0A0B4J1G8 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.95■□□□□ 0.46
Trbv2A0A0B4J1G8 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Trbv2A0A0B4J1G8 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv2A0A0B4J1G8 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv2A0A0B4J1G8 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Trbv2A0A0B4J1G8 Gm10420-201ENSMUST00000121713 882 ntBASIC17.95■□□□□ 0.46
Trbv2A0A0B4J1G8 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv2A0A0B4J1G8 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Trbv2A0A0B4J1G8 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv2A0A0B4J1G8 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv2A0A0B4J1G8 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv2A0A0B4J1G8 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv2A0A0B4J1G8 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv2A0A0B4J1G8 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv2A0A0B4J1G8 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv2A0A0B4J1G8 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv2A0A0B4J1G8 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv2A0A0B4J1G8 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Trbv2A0A0B4J1G8 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.94■□□□□ 0.46
Trbv2A0A0B4J1G8 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.94■□□□□ 0.46
Trbv2A0A0B4J1G8 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv2A0A0B4J1G8 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv2A0A0B4J1G8 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv2A0A0B4J1G8 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Trbv2A0A0B4J1G8 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv2A0A0B4J1G8 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv2A0A0B4J1G8 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv2A0A0B4J1G8 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv2A0A0B4J1G8 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv2A0A0B4J1G8 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Trbv2A0A0B4J1G8 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv2A0A0B4J1G8 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.93■□□□□ 0.46
Trbv2A0A0B4J1G8 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv2A0A0B4J1G8 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv2A0A0B4J1G8 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv2A0A0B4J1G8 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv2A0A0B4J1G8 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Trbv2A0A0B4J1G8 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trbv2A0A0B4J1G8 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv2A0A0B4J1G8 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv2A0A0B4J1G8 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv2A0A0B4J1G8 Gm11175-201ENSMUST00000116172 543 ntBASIC17.92■□□□□ 0.46
Trbv2A0A0B4J1G8 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.92■□□□□ 0.46
Trbv2A0A0B4J1G8 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv2A0A0B4J1G8 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv2A0A0B4J1G8 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv2A0A0B4J1G8 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv2A0A0B4J1G8 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv2A0A0B4J1G8 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.92■□□□□ 0.46
Trbv2A0A0B4J1G8 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv2A0A0B4J1G8 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv2A0A0B4J1G8 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv2A0A0B4J1G8 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.91■□□□□ 0.46
Trbv2A0A0B4J1G8 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Trbv2A0A0B4J1G8 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv2A0A0B4J1G8 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Trbv2A0A0B4J1G8 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.91■□□□□ 0.46
Trbv2A0A0B4J1G8 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Trbv2A0A0B4J1G8 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv2A0A0B4J1G8 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv2A0A0B4J1G8 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.91■□□□□ 0.46
Trbv2A0A0B4J1G8 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv2A0A0B4J1G8 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv2A0A0B4J1G8 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv2A0A0B4J1G8 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv2A0A0B4J1G8 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv2A0A0B4J1G8 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv2A0A0B4J1G8 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv2A0A0B4J1G8 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.9■□□□□ 0.46
Trbv2A0A0B4J1G8 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv2A0A0B4J1G8 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv2A0A0B4J1G8 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv2A0A0B4J1G8 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.89■□□□□ 0.46
Trbv2A0A0B4J1G8 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.89■□□□□ 0.45
Trbv2A0A0B4J1G8 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv2A0A0B4J1G8 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv2A0A0B4J1G8 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv2A0A0B4J1G8 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv2A0A0B4J1G8 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv2A0A0B4J1G8 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Trbv2A0A0B4J1G8 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv2A0A0B4J1G8 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms