Protein–RNA interactions for Protein: A0A0B4J1F6

BC053393, cDNA sequence BC053393, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC053393A0A0B4J1F6 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
BC053393A0A0B4J1F6 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
BC053393A0A0B4J1F6 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BC053393A0A0B4J1F6 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
BC053393A0A0B4J1F6 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BC053393A0A0B4J1F6 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BC053393A0A0B4J1F6 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BC053393A0A0B4J1F6 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BC053393A0A0B4J1F6 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BC053393A0A0B4J1F6 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.13■□□□□ 0.17
BC053393A0A0B4J1F6 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC16.13■□□□□ 0.17
BC053393A0A0B4J1F6 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BC053393A0A0B4J1F6 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BC053393A0A0B4J1F6 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
BC053393A0A0B4J1F6 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
BC053393A0A0B4J1F6 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
BC053393A0A0B4J1F6 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
BC053393A0A0B4J1F6 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BC053393A0A0B4J1F6 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BC053393A0A0B4J1F6 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.12■□□□□ 0.17
BC053393A0A0B4J1F6 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
BC053393A0A0B4J1F6 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BC053393A0A0B4J1F6 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
BC053393A0A0B4J1F6 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BC053393A0A0B4J1F6 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
BC053393A0A0B4J1F6 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC16.12■□□□□ 0.17
BC053393A0A0B4J1F6 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC16.12■□□□□ 0.17
BC053393A0A0B4J1F6 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BC053393A0A0B4J1F6 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BC053393A0A0B4J1F6 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
BC053393A0A0B4J1F6 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC16.12■□□□□ 0.17
BC053393A0A0B4J1F6 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
BC053393A0A0B4J1F6 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
BC053393A0A0B4J1F6 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BC053393A0A0B4J1F6 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
BC053393A0A0B4J1F6 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BC053393A0A0B4J1F6 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
BC053393A0A0B4J1F6 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
BC053393A0A0B4J1F6 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
BC053393A0A0B4J1F6 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BC053393A0A0B4J1F6 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BC053393A0A0B4J1F6 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BC053393A0A0B4J1F6 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC16.11■□□□□ 0.17
BC053393A0A0B4J1F6 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BC053393A0A0B4J1F6 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
BC053393A0A0B4J1F6 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
BC053393A0A0B4J1F6 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BC053393A0A0B4J1F6 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BC053393A0A0B4J1F6 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC16.1■□□□□ 0.17
BC053393A0A0B4J1F6 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
BC053393A0A0B4J1F6 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
BC053393A0A0B4J1F6 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
BC053393A0A0B4J1F6 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
BC053393A0A0B4J1F6 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BC053393A0A0B4J1F6 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BC053393A0A0B4J1F6 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
BC053393A0A0B4J1F6 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BC053393A0A0B4J1F6 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
BC053393A0A0B4J1F6 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
BC053393A0A0B4J1F6 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BC053393A0A0B4J1F6 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
BC053393A0A0B4J1F6 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
BC053393A0A0B4J1F6 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BC053393A0A0B4J1F6 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
BC053393A0A0B4J1F6 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC16.09■□□□□ 0.17
BC053393A0A0B4J1F6 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BC053393A0A0B4J1F6 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.09■□□□□ 0.17
BC053393A0A0B4J1F6 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
BC053393A0A0B4J1F6 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
BC053393A0A0B4J1F6 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
BC053393A0A0B4J1F6 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BC053393A0A0B4J1F6 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.09■□□□□ 0.17
BC053393A0A0B4J1F6 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
BC053393A0A0B4J1F6 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
BC053393A0A0B4J1F6 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
BC053393A0A0B4J1F6 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
BC053393A0A0B4J1F6 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
BC053393A0A0B4J1F6 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BC053393A0A0B4J1F6 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
BC053393A0A0B4J1F6 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC16.08■□□□□ 0.16
BC053393A0A0B4J1F6 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.08■□□□□ 0.16
BC053393A0A0B4J1F6 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
BC053393A0A0B4J1F6 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
BC053393A0A0B4J1F6 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BC053393A0A0B4J1F6 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.08■□□□□ 0.16
BC053393A0A0B4J1F6 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BC053393A0A0B4J1F6 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
BC053393A0A0B4J1F6 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
BC053393A0A0B4J1F6 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
BC053393A0A0B4J1F6 Nsd1-203ENSMUST00000224156 1149 ntBASIC16.07■□□□□ 0.16
BC053393A0A0B4J1F6 Gm28536-201ENSMUST00000190971 1317 ntBASIC16.07■□□□□ 0.16
BC053393A0A0B4J1F6 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BC053393A0A0B4J1F6 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
BC053393A0A0B4J1F6 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.07■□□□□ 0.16
BC053393A0A0B4J1F6 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.07■□□□□ 0.16
BC053393A0A0B4J1F6 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
BC053393A0A0B4J1F6 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
BC053393A0A0B4J1F6 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
BC053393A0A0B4J1F6 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BC053393A0A0B4J1F6 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms