Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ighv1-43A0A0A6YXN5 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ighv1-43A0A0A6YXN5 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ighv1-43A0A0A6YXN5 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ighv1-43A0A0A6YXN5 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.75■□□□□ 0.59
Ighv1-43A0A0A6YXN5 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ighv1-43A0A0A6YXN5 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ighv1-43A0A0A6YXN5 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ighv1-43A0A0A6YXN5 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ighv1-43A0A0A6YXN5 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ighv1-43A0A0A6YXN5 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
Ighv1-43A0A0A6YXN5 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ighv1-43A0A0A6YXN5 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.74■□□□□ 0.59
Ighv1-43A0A0A6YXN5 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ighv1-43A0A0A6YXN5 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Ighv1-43A0A0A6YXN5 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.74■□□□□ 0.59
Ighv1-43A0A0A6YXN5 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.74■□□□□ 0.59
Ighv1-43A0A0A6YXN5 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ighv1-43A0A0A6YXN5 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Ighv1-43A0A0A6YXN5 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.74■□□□□ 0.59
Ighv1-43A0A0A6YXN5 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv1-43A0A0A6YXN5 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Ighv1-43A0A0A6YXN5 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv1-43A0A0A6YXN5 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Ighv1-43A0A0A6YXN5 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv1-43A0A0A6YXN5 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv1-43A0A0A6YXN5 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv1-43A0A0A6YXN5 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv1-43A0A0A6YXN5 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv1-43A0A0A6YXN5 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv1-43A0A0A6YXN5 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv1-43A0A0A6YXN5 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv1-43A0A0A6YXN5 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Ighv1-43A0A0A6YXN5 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv1-43A0A0A6YXN5 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv1-43A0A0A6YXN5 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
Ighv1-43A0A0A6YXN5 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv1-43A0A0A6YXN5 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv1-43A0A0A6YXN5 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv1-43A0A0A6YXN5 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv1-43A0A0A6YXN5 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
Ighv1-43A0A0A6YXN5 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.71■□□□□ 0.59
Ighv1-43A0A0A6YXN5 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv1-43A0A0A6YXN5 Mir6236-201ENSMUST00000184437 123 ntBASIC18.71■□□□□ 0.59
Ighv1-43A0A0A6YXN5 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv1-43A0A0A6YXN5 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv1-43A0A0A6YXN5 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv1-43A0A0A6YXN5 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv1-43A0A0A6YXN5 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv1-43A0A0A6YXN5 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv1-43A0A0A6YXN5 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv1-43A0A0A6YXN5 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.7■□□□□ 0.58
Ighv1-43A0A0A6YXN5 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv1-43A0A0A6YXN5 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv1-43A0A0A6YXN5 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv1-43A0A0A6YXN5 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Ighv1-43A0A0A6YXN5 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv1-43A0A0A6YXN5 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv1-43A0A0A6YXN5 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ighv1-43A0A0A6YXN5 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ighv1-43A0A0A6YXN5 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ighv1-43A0A0A6YXN5 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.69■□□□□ 0.58
Ighv1-43A0A0A6YXN5 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ighv1-43A0A0A6YXN5 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.69■□□□□ 0.58
Ighv1-43A0A0A6YXN5 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.69■□□□□ 0.58
Ighv1-43A0A0A6YXN5 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ighv1-43A0A0A6YXN5 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ighv1-43A0A0A6YXN5 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Ighv1-43A0A0A6YXN5 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv1-43A0A0A6YXN5 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv1-43A0A0A6YXN5 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv1-43A0A0A6YXN5 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv1-43A0A0A6YXN5 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Ighv1-43A0A0A6YXN5 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Ighv1-43A0A0A6YXN5 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Ighv1-43A0A0A6YXN5 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv1-43A0A0A6YXN5 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv1-43A0A0A6YXN5 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv1-43A0A0A6YXN5 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv1-43A0A0A6YXN5 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv1-43A0A0A6YXN5 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv1-43A0A0A6YXN5 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-43A0A0A6YXN5 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-43A0A0A6YXN5 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-43A0A0A6YXN5 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Ighv1-43A0A0A6YXN5 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-43A0A0A6YXN5 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
Ighv1-43A0A0A6YXN5 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.67■□□□□ 0.58
Ighv1-43A0A0A6YXN5 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.67■□□□□ 0.58
Ighv1-43A0A0A6YXN5 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-43A0A0A6YXN5 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-43A0A0A6YXN5 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-43A0A0A6YXN5 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-43A0A0A6YXN5 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-43A0A0A6YXN5 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-43A0A0A6YXN5 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-43A0A0A6YXN5 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv1-43A0A0A6YXN5 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.66■□□□□ 0.58
Ighv1-43A0A0A6YXN5 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv1-43A0A0A6YXN5 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms