Protein–RNA interactions for Protein: A0A0A6YXF1

Ighv3-4, Immunoglobulin heavy variable V3-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-4A0A0A6YXF1 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ighv3-4A0A0A6YXF1 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ighv3-4A0A0A6YXF1 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ighv3-4A0A0A6YXF1 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.86■□□□□ 0.29
Ighv3-4A0A0A6YXF1 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ighv3-4A0A0A6YXF1 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ighv3-4A0A0A6YXF1 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Ighv3-4A0A0A6YXF1 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ighv3-4A0A0A6YXF1 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ighv3-4A0A0A6YXF1 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Ighv3-4A0A0A6YXF1 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC16.85■□□□□ 0.29
Ighv3-4A0A0A6YXF1 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ighv3-4A0A0A6YXF1 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.85■□□□□ 0.29
Ighv3-4A0A0A6YXF1 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ighv3-4A0A0A6YXF1 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Ighv3-4A0A0A6YXF1 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ighv3-4A0A0A6YXF1 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC16.85■□□□□ 0.29
Ighv3-4A0A0A6YXF1 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ighv3-4A0A0A6YXF1 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Ighv3-4A0A0A6YXF1 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ighv3-4A0A0A6YXF1 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ighv3-4A0A0A6YXF1 AC153962.1-201ENSMUST00000218530 1948 ntBASIC16.84■□□□□ 0.29
Ighv3-4A0A0A6YXF1 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ighv3-4A0A0A6YXF1 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Ighv3-4A0A0A6YXF1 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Ighv3-4A0A0A6YXF1 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.84■□□□□ 0.29
Ighv3-4A0A0A6YXF1 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ighv3-4A0A0A6YXF1 Gm37179-201ENSMUST00000194862 823 ntBASIC16.84■□□□□ 0.29
Ighv3-4A0A0A6YXF1 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ighv3-4A0A0A6YXF1 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ighv3-4A0A0A6YXF1 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ighv3-4A0A0A6YXF1 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ighv3-4A0A0A6YXF1 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ighv3-4A0A0A6YXF1 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ighv3-4A0A0A6YXF1 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Gm11421-201ENSMUST00000122124 294 ntBASIC16.83■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC16.83■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.82■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.82■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Gm42778-201ENSMUST00000199644 553 ntBASIC16.82■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC16.82■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv3-4A0A0A6YXF1 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.8■□□□□ 0.28
Ighv3-4A0A0A6YXF1 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.79■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv3-4A0A0A6YXF1 AV356131-201ENSMUST00000206201 750 ntBASIC16.79■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.78■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv3-4A0A0A6YXF1 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.77■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms