Protein–RNA interactions for Protein: A0A0A6YXC3

Ighv1-52, Immunoglobulin heavy variable 1-52 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-52A0A0A6YXC3 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC15.39■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Gm43530-201ENSMUST00000195920 274 ntBASIC15.39■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC15.38■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv1-52A0A0A6YXC3 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC15.38■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Golgb1-201ENSMUST00000023534 498 ntBASIC15.38■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv1-52A0A0A6YXC3 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Gm38160-201ENSMUST00000193090 2499 ntBASIC15.38■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC15.38■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Ighv1-52A0A0A6YXC3 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC15.36■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC15.36■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Krt8-ps-201ENSMUST00000208495 945 ntBASIC15.36■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC15.36■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-52A0A0A6YXC3 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Gm43006-201ENSMUST00000197702 1602 ntBASIC15.35■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Gm13241-201ENSMUST00000094493 780 ntBASIC15.34■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Notumos-201ENSMUST00000151998 2659 ntBASIC15.34■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ighv1-52A0A0A6YXC3 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC15.33■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC15.33■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Gm43759-201ENSMUST00000196925 1261 ntBASIC15.33■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ighv1-52A0A0A6YXC3 AC166356.1-201ENSMUST00000228236 1426 ntBASIC15.33■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC15.33■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv1-52A0A0A6YXC3 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC15.32■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv1-52A0A0A6YXC3 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms