Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trbc1A0A0A6YWV4 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbc1A0A0A6YWV4 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbc1A0A0A6YWV4 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbc1A0A0A6YWV4 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trbc1A0A0A6YWV4 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trbc1A0A0A6YWV4 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trbc1A0A0A6YWV4 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Trbc1A0A0A6YWV4 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Trbc1A0A0A6YWV4 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Trbc1A0A0A6YWV4 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trbc1A0A0A6YWV4 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trbc1A0A0A6YWV4 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trbc1A0A0A6YWV4 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trbc1A0A0A6YWV4 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.52■□□□□ 0.56
Trbc1A0A0A6YWV4 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.52■□□□□ 0.56
Trbc1A0A0A6YWV4 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.52■□□□□ 0.56
Trbc1A0A0A6YWV4 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Trbc1A0A0A6YWV4 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trbc1A0A0A6YWV4 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trbc1A0A0A6YWV4 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trbc1A0A0A6YWV4 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trbc1A0A0A6YWV4 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trbc1A0A0A6YWV4 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trbc1A0A0A6YWV4 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trbc1A0A0A6YWV4 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trbc1A0A0A6YWV4 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.51■□□□□ 0.55
Trbc1A0A0A6YWV4 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trbc1A0A0A6YWV4 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Trbc1A0A0A6YWV4 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.51■□□□□ 0.55
Trbc1A0A0A6YWV4 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trbc1A0A0A6YWV4 Gm13241-201ENSMUST00000094493 780 ntBASIC18.51■□□□□ 0.55
Trbc1A0A0A6YWV4 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trbc1A0A0A6YWV4 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trbc1A0A0A6YWV4 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trbc1A0A0A6YWV4 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.5■□□□□ 0.55
Trbc1A0A0A6YWV4 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
Trbc1A0A0A6YWV4 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.5■□□□□ 0.55
Trbc1A0A0A6YWV4 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trbc1A0A0A6YWV4 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trbc1A0A0A6YWV4 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.5■□□□□ 0.55
Trbc1A0A0A6YWV4 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trbc1A0A0A6YWV4 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Trbc1A0A0A6YWV4 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trbc1A0A0A6YWV4 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trbc1A0A0A6YWV4 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trbc1A0A0A6YWV4 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trbc1A0A0A6YWV4 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Trbc1A0A0A6YWV4 Golgb1-201ENSMUST00000023534 498 ntBASIC18.49■□□□□ 0.55
Trbc1A0A0A6YWV4 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trbc1A0A0A6YWV4 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trbc1A0A0A6YWV4 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Trbc1A0A0A6YWV4 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trbc1A0A0A6YWV4 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Trbc1A0A0A6YWV4 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trbc1A0A0A6YWV4 Golph3-202ENSMUST00000226517 2359 ntBASIC18.48■□□□□ 0.55
Trbc1A0A0A6YWV4 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trbc1A0A0A6YWV4 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trbc1A0A0A6YWV4 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trbc1A0A0A6YWV4 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trbc1A0A0A6YWV4 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trbc1A0A0A6YWV4 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trbc1A0A0A6YWV4 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.48■□□□□ 0.55
Trbc1A0A0A6YWV4 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trbc1A0A0A6YWV4 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
Trbc1A0A0A6YWV4 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trbc1A0A0A6YWV4 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trbc1A0A0A6YWV4 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trbc1A0A0A6YWV4 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trbc1A0A0A6YWV4 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trbc1A0A0A6YWV4 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trbc1A0A0A6YWV4 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.48■□□□□ 0.55
Trbc1A0A0A6YWV4 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.47■□□□□ 0.55
Trbc1A0A0A6YWV4 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trbc1A0A0A6YWV4 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trbc1A0A0A6YWV4 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trbc1A0A0A6YWV4 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.47■□□□□ 0.55
Trbc1A0A0A6YWV4 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trbc1A0A0A6YWV4 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Trbc1A0A0A6YWV4 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trbc1A0A0A6YWV4 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trbc1A0A0A6YWV4 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trbc1A0A0A6YWV4 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trbc1A0A0A6YWV4 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Trbc1A0A0A6YWV4 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.46■□□□□ 0.55
Trbc1A0A0A6YWV4 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trbc1A0A0A6YWV4 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
Trbc1A0A0A6YWV4 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trbc1A0A0A6YWV4 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trbc1A0A0A6YWV4 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trbc1A0A0A6YWV4 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trbc1A0A0A6YWV4 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trbc1A0A0A6YWV4 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trbc1A0A0A6YWV4 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trbc1A0A0A6YWV4 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trbc1A0A0A6YWV4 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trbc1A0A0A6YWV4 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trbc1A0A0A6YWV4 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Trbc1A0A0A6YWV4 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trbc1A0A0A6YWV4 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 148.6 ms