Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Trav6d-5A0A075B6B9 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6d-5A0A075B6B9 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.35■□□□□ 0.21
Trav6d-5A0A075B6B9 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6d-5A0A075B6B9 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC16.35■□□□□ 0.21
Trav6d-5A0A075B6B9 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6d-5A0A075B6B9 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.35■□□□□ 0.21
Trav6d-5A0A075B6B9 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6d-5A0A075B6B9 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6d-5A0A075B6B9 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6d-5A0A075B6B9 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6d-5A0A075B6B9 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Trav6d-5A0A075B6B9 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6d-5A0A075B6B9 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6d-5A0A075B6B9 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6d-5A0A075B6B9 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6d-5A0A075B6B9 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6d-5A0A075B6B9 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6d-5A0A075B6B9 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6d-5A0A075B6B9 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6d-5A0A075B6B9 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6d-5A0A075B6B9 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6d-5A0A075B6B9 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav6d-5A0A075B6B9 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6d-5A0A075B6B9 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6d-5A0A075B6B9 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC16.33■□□□□ 0.2
Trav6d-5A0A075B6B9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Trav6d-5A0A075B6B9 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6d-5A0A075B6B9 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6d-5A0A075B6B9 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6d-5A0A075B6B9 Gm11847-201ENSMUST00000125165 1119 ntBASIC16.32■□□□□ 0.2
Trav6d-5A0A075B6B9 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6d-5A0A075B6B9 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6d-5A0A075B6B9 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6d-5A0A075B6B9 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6d-5A0A075B6B9 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6d-5A0A075B6B9 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6d-5A0A075B6B9 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6d-5A0A075B6B9 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Trav6d-5A0A075B6B9 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6d-5A0A075B6B9 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6d-5A0A075B6B9 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6d-5A0A075B6B9 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6d-5A0A075B6B9 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6d-5A0A075B6B9 Gm8093-201ENSMUST00000128935 1892 ntBASIC16.31■□□□□ 0.2
Trav6d-5A0A075B6B9 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6d-5A0A075B6B9 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6d-5A0A075B6B9 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.31■□□□□ 0.2
Trav6d-5A0A075B6B9 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6d-5A0A075B6B9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6d-5A0A075B6B9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.31■□□□□ 0.2
Trav6d-5A0A075B6B9 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6d-5A0A075B6B9 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6d-5A0A075B6B9 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.31■□□□□ 0.2
Trav6d-5A0A075B6B9 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6d-5A0A075B6B9 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6d-5A0A075B6B9 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.31■□□□□ 0.2
Trav6d-5A0A075B6B9 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6d-5A0A075B6B9 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trav6d-5A0A075B6B9 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6d-5A0A075B6B9 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6d-5A0A075B6B9 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6d-5A0A075B6B9 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6d-5A0A075B6B9 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trav6d-5A0A075B6B9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6d-5A0A075B6B9 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trav6d-5A0A075B6B9 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Trav6d-5A0A075B6B9 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Trav6d-5A0A075B6B9 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6d-5A0A075B6B9 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6d-5A0A075B6B9 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Trav6d-5A0A075B6B9 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6d-5A0A075B6B9 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6d-5A0A075B6B9 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6d-5A0A075B6B9 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trav6d-5A0A075B6B9 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6d-5A0A075B6B9 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.29■□□□□ 0.2
Trav6d-5A0A075B6B9 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6d-5A0A075B6B9 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6d-5A0A075B6B9 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6d-5A0A075B6B9 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6d-5A0A075B6B9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trav6d-5A0A075B6B9 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6d-5A0A075B6B9 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6d-5A0A075B6B9 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6d-5A0A075B6B9 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6d-5A0A075B6B9 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC16.28■□□□□ 0.2
Trav6d-5A0A075B6B9 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6d-5A0A075B6B9 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6d-5A0A075B6B9 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6d-5A0A075B6B9 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6d-5A0A075B6B9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6d-5A0A075B6B9 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6d-5A0A075B6B9 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6d-5A0A075B6B9 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav6d-5A0A075B6B9 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav6d-5A0A075B6B9 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Trav6d-5A0A075B6B9 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav6d-5A0A075B6B9 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav6d-5A0A075B6B9 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms