Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav18A0A075B656 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav18A0A075B656 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav18A0A075B656 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav18A0A075B656 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav18A0A075B656 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Trav18A0A075B656 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.57■□□□□ 0.24
Trav18A0A075B656 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav18A0A075B656 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav18A0A075B656 Gm43566-201ENSMUST00000196851 808 ntBASIC16.57■□□□□ 0.24
Trav18A0A075B656 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trav18A0A075B656 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav18A0A075B656 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav18A0A075B656 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.57■□□□□ 0.24
Trav18A0A075B656 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav18A0A075B656 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav18A0A075B656 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav18A0A075B656 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav18A0A075B656 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav18A0A075B656 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav18A0A075B656 Gm5921-201ENSMUST00000075898 882 ntBASIC16.56■□□□□ 0.24
Trav18A0A075B656 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trav18A0A075B656 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav18A0A075B656 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav18A0A075B656 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav18A0A075B656 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Trav18A0A075B656 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav18A0A075B656 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trav18A0A075B656 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav18A0A075B656 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav18A0A075B656 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Trav18A0A075B656 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav18A0A075B656 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav18A0A075B656 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav18A0A075B656 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav18A0A075B656 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav18A0A075B656 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC16.54■□□□□ 0.24
Trav18A0A075B656 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trav18A0A075B656 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trav18A0A075B656 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC16.54■□□□□ 0.24
Trav18A0A075B656 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Trav18A0A075B656 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav18A0A075B656 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.53■□□□□ 0.24
Trav18A0A075B656 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav18A0A075B656 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav18A0A075B656 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav18A0A075B656 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC16.53■□□□□ 0.24
Trav18A0A075B656 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.53■□□□□ 0.24
Trav18A0A075B656 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trav18A0A075B656 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav18A0A075B656 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav18A0A075B656 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.53■□□□□ 0.24
Trav18A0A075B656 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav18A0A075B656 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav18A0A075B656 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav18A0A075B656 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Trav18A0A075B656 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav18A0A075B656 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav18A0A075B656 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav18A0A075B656 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trav18A0A075B656 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.52■□□□□ 0.23
Trav18A0A075B656 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trav18A0A075B656 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav18A0A075B656 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav18A0A075B656 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.51■□□□□ 0.23
Trav18A0A075B656 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav18A0A075B656 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav18A0A075B656 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC16.51■□□□□ 0.23
Trav18A0A075B656 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Trav18A0A075B656 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.51■□□□□ 0.23
Trav18A0A075B656 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.51■□□□□ 0.23
Trav18A0A075B656 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav18A0A075B656 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav18A0A075B656 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Trav18A0A075B656 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Trav18A0A075B656 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trav18A0A075B656 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.5■□□□□ 0.23
Trav18A0A075B656 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trav18A0A075B656 Gm10399-202ENSMUST00000202768 748 ntBASIC16.5■□□□□ 0.23
Trav18A0A075B656 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Trav18A0A075B656 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav18A0A075B656 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav18A0A075B656 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav18A0A075B656 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav18A0A075B656 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trav18A0A075B656 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav18A0A075B656 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav18A0A075B656 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav18A0A075B656 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav18A0A075B656 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC16.49■□□□□ 0.23
Trav18A0A075B656 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav18A0A075B656 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav18A0A075B656 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav18A0A075B656 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.49■□□□□ 0.23
Trav18A0A075B656 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav18A0A075B656 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav18A0A075B656 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav18A0A075B656 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav18A0A075B656 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav18A0A075B656 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms