Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav5-4A0A075B652 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav5-4A0A075B652 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav5-4A0A075B652 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav5-4A0A075B652 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav5-4A0A075B652 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Trav5-4A0A075B652 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav5-4A0A075B652 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav5-4A0A075B652 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav5-4A0A075B652 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.79■□□□□ 0.28
Trav5-4A0A075B652 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Trav5-4A0A075B652 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav5-4A0A075B652 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav5-4A0A075B652 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav5-4A0A075B652 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.78■□□□□ 0.28
Trav5-4A0A075B652 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trav5-4A0A075B652 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Trav5-4A0A075B652 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC16.78■□□□□ 0.28
Trav5-4A0A075B652 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Trav5-4A0A075B652 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav5-4A0A075B652 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav5-4A0A075B652 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav5-4A0A075B652 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav5-4A0A075B652 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav5-4A0A075B652 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav5-4A0A075B652 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav5-4A0A075B652 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav5-4A0A075B652 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav5-4A0A075B652 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Trav5-4A0A075B652 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trav5-4A0A075B652 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav5-4A0A075B652 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav5-4A0A075B652 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav5-4A0A075B652 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav5-4A0A075B652 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.77■□□□□ 0.27
Trav5-4A0A075B652 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav5-4A0A075B652 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav5-4A0A075B652 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Trav5-4A0A075B652 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav5-4A0A075B652 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav5-4A0A075B652 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav5-4A0A075B652 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav5-4A0A075B652 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Trav5-4A0A075B652 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav5-4A0A075B652 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav5-4A0A075B652 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Trav5-4A0A075B652 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC16.76■□□□□ 0.27
Trav5-4A0A075B652 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Trav5-4A0A075B652 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Trav5-4A0A075B652 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav5-4A0A075B652 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav5-4A0A075B652 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav5-4A0A075B652 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Trav5-4A0A075B652 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav5-4A0A075B652 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav5-4A0A075B652 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav5-4A0A075B652 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav5-4A0A075B652 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav5-4A0A075B652 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC16.75■□□□□ 0.27
Trav5-4A0A075B652 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Trav5-4A0A075B652 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trav5-4A0A075B652 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav5-4A0A075B652 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav5-4A0A075B652 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav5-4A0A075B652 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav5-4A0A075B652 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav5-4A0A075B652 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav5-4A0A075B652 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Trav5-4A0A075B652 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC16.73■□□□□ 0.27
Trav5-4A0A075B652 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Trav5-4A0A075B652 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav5-4A0A075B652 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav5-4A0A075B652 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav5-4A0A075B652 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav5-4A0A075B652 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav5-4A0A075B652 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav5-4A0A075B652 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav5-4A0A075B652 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav5-4A0A075B652 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav5-4A0A075B652 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav5-4A0A075B652 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav5-4A0A075B652 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav5-4A0A075B652 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC16.72■□□□□ 0.27
Trav5-4A0A075B652 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav5-4A0A075B652 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.72■□□□□ 0.27
Trav5-4A0A075B652 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav5-4A0A075B652 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav5-4A0A075B652 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav5-4A0A075B652 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Trav5-4A0A075B652 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav5-4A0A075B652 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav5-4A0A075B652 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav5-4A0A075B652 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trav5-4A0A075B652 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav5-4A0A075B652 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav5-4A0A075B652 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav5-4A0A075B652 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav5-4A0A075B652 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav5-4A0A075B652 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav5-4A0A075B652 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms