Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav8-1A0A075B641 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8-1A0A075B641 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8-1A0A075B641 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8-1A0A075B641 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC14.43□□□□□ -0.1
Trav8-1A0A075B641 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8-1A0A075B641 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav8-1A0A075B641 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trav8-1A0A075B641 Gm9812-201ENSMUST00000061934 968 ntBASIC14.43□□□□□ -0.1
Trav8-1A0A075B641 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC14.43□□□□□ -0.1
Trav8-1A0A075B641 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Trav8-1A0A075B641 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8-1A0A075B641 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8-1A0A075B641 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8-1A0A075B641 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8-1A0A075B641 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC14.42□□□□□ -0.1
Trav8-1A0A075B641 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8-1A0A075B641 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav8-1A0A075B641 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trav8-1A0A075B641 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Trav8-1A0A075B641 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8-1A0A075B641 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8-1A0A075B641 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8-1A0A075B641 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC14.42□□□□□ -0.1
Trav8-1A0A075B641 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8-1A0A075B641 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8-1A0A075B641 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trav8-1A0A075B641 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8-1A0A075B641 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8-1A0A075B641 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8-1A0A075B641 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8-1A0A075B641 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trav8-1A0A075B641 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8-1A0A075B641 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC14.42□□□□□ -0.1
Trav8-1A0A075B641 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8-1A0A075B641 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8-1A0A075B641 AC164883.3-201ENSMUST00000227396 1774 ntBASIC14.42□□□□□ -0.1
Trav8-1A0A075B641 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8-1A0A075B641 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8-1A0A075B641 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8-1A0A075B641 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8-1A0A075B641 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8-1A0A075B641 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav8-1A0A075B641 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8-1A0A075B641 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trav8-1A0A075B641 AC122317.2-201ENSMUST00000218708 1248 ntBASIC14.41□□□□□ -0.1
Trav8-1A0A075B641 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8-1A0A075B641 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8-1A0A075B641 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trav8-1A0A075B641 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8-1A0A075B641 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8-1A0A075B641 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trav8-1A0A075B641 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8-1A0A075B641 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trav8-1A0A075B641 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trav8-1A0A075B641 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trav8-1A0A075B641 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC14.4□□□□□ -0.1
Trav8-1A0A075B641 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8-1A0A075B641 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8-1A0A075B641 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trav8-1A0A075B641 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8-1A0A075B641 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trav8-1A0A075B641 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8-1A0A075B641 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8-1A0A075B641 AC152827.1-201ENSMUST00000221143 2189 ntBASIC14.4□□□□□ -0.1
Trav8-1A0A075B641 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8-1A0A075B641 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8-1A0A075B641 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8-1A0A075B641 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8-1A0A075B641 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8-1A0A075B641 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8-1A0A075B641 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8-1A0A075B641 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8-1A0A075B641 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8-1A0A075B641 Mir3960-201ENSMUST00000198213 73 ntBASIC14.39□□□□□ -0.11
Trav8-1A0A075B641 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC14.39□□□□□ -0.11
Trav8-1A0A075B641 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8-1A0A075B641 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8-1A0A075B641 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav8-1A0A075B641 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8-1A0A075B641 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trav8-1A0A075B641 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trav8-1A0A075B641 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trav8-1A0A075B641 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8-1A0A075B641 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trav8-1A0A075B641 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8-1A0A075B641 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8-1A0A075B641 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8-1A0A075B641 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trav8-1A0A075B641 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC14.38□□□□□ -0.11
Trav8-1A0A075B641 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8-1A0A075B641 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8-1A0A075B641 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8-1A0A075B641 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8-1A0A075B641 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8-1A0A075B641 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav8-1A0A075B641 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8-1A0A075B641 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav8-1A0A075B641 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8-1A0A075B641 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms