Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC16.03■□□□□ 0.16
Trav4-2A0A075B638 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav4-2A0A075B638 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav4-2A0A075B638 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav4-2A0A075B638 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav4-2A0A075B638 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav4-2A0A075B638 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav4-2A0A075B638 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Trav4-2A0A075B638 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trav4-2A0A075B638 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Trav4-2A0A075B638 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Trav4-2A0A075B638 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav4-2A0A075B638 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trav4-2A0A075B638 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Trav4-2A0A075B638 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trav4-2A0A075B638 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Trav4-2A0A075B638 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav4-2A0A075B638 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav4-2A0A075B638 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav4-2A0A075B638 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav4-2A0A075B638 Gm6311-201ENSMUST00000073790 878 ntBASIC16.01■□□□□ 0.15
Trav4-2A0A075B638 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav4-2A0A075B638 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav4-2A0A075B638 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Trav4-2A0A075B638 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav4-2A0A075B638 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav4-2A0A075B638 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16■□□□□ 0.15
Trav4-2A0A075B638 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav4-2A0A075B638 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav4-2A0A075B638 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav4-2A0A075B638 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav4-2A0A075B638 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav4-2A0A075B638 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav4-2A0A075B638 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav4-2A0A075B638 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav4-2A0A075B638 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav4-2A0A075B638 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav4-2A0A075B638 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav4-2A0A075B638 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Trav4-2A0A075B638 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav4-2A0A075B638 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.99■□□□□ 0.15
Trav4-2A0A075B638 AC151971.4-201ENSMUST00000214717 704 ntBASIC15.99■□□□□ 0.15
Trav4-2A0A075B638 Gm9806-201ENSMUST00000051080 552 ntBASIC15.99■□□□□ 0.15
Trav4-2A0A075B638 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav4-2A0A075B638 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav4-2A0A075B638 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav4-2A0A075B638 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav4-2A0A075B638 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav4-2A0A075B638 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Trav4-2A0A075B638 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav4-2A0A075B638 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav4-2A0A075B638 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC15.98■□□□□ 0.15
Trav4-2A0A075B638 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC15.98■□□□□ 0.15
Trav4-2A0A075B638 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav4-2A0A075B638 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Trav4-2A0A075B638 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav4-2A0A075B638 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav4-2A0A075B638 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav4-2A0A075B638 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav4-2A0A075B638 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC15.98■□□□□ 0.15
Trav4-2A0A075B638 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Trav4-2A0A075B638 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav4-2A0A075B638 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Trav4-2A0A075B638 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav4-2A0A075B638 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav4-2A0A075B638 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav4-2A0A075B638 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav4-2A0A075B638 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav4-2A0A075B638 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav4-2A0A075B638 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav4-2A0A075B638 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav4-2A0A075B638 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC15.97■□□□□ 0.15
Trav4-2A0A075B638 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav4-2A0A075B638 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.97■□□□□ 0.15
Trav4-2A0A075B638 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav4-2A0A075B638 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Trav4-2A0A075B638 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav4-2A0A075B638 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav4-2A0A075B638 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav4-2A0A075B638 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav4-2A0A075B638 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav4-2A0A075B638 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav4-2A0A075B638 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav4-2A0A075B638 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Trav4-2A0A075B638 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trav4-2A0A075B638 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Trav4-2A0A075B638 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav4-2A0A075B638 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav4-2A0A075B638 Gm43909-201ENSMUST00000203443 1876 ntBASIC15.95■□□□□ 0.14
Trav4-2A0A075B638 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav4-2A0A075B638 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav4-2A0A075B638 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC15.95■□□□□ 0.14
Trav4-2A0A075B638 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC15.95■□□□□ 0.14
Trav4-2A0A075B638 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav4-2A0A075B638 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav4-2A0A075B638 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav4-2A0A075B638 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav4-2A0A075B638 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav4-2A0A075B638 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Trav4-2A0A075B638 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms