Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13d-1A0A075B606 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trav13d-1A0A075B606 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13d-1A0A075B606 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13d-1A0A075B606 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13d-1A0A075B606 Hsf1-207ENSMUST00000228371 2102 ntBASIC14.74□□□□□ -0.05
Trav13d-1A0A075B606 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trav13d-1A0A075B606 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13d-1A0A075B606 Gm9207-201ENSMUST00000198773 1115 ntBASIC14.74□□□□□ -0.05
Trav13d-1A0A075B606 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC14.74□□□□□ -0.05
Trav13d-1A0A075B606 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13d-1A0A075B606 Kdm3b-204ENSMUST00000224715 2032 ntBASIC14.74□□□□□ -0.05
Trav13d-1A0A075B606 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13d-1A0A075B606 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13d-1A0A075B606 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13d-1A0A075B606 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC14.74□□□□□ -0.05
Trav13d-1A0A075B606 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13d-1A0A075B606 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trav13d-1A0A075B606 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13d-1A0A075B606 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trav13d-1A0A075B606 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Trav13d-1A0A075B606 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13d-1A0A075B606 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13d-1A0A075B606 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
Trav13d-1A0A075B606 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trav13d-1A0A075B606 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13d-1A0A075B606 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav13d-1A0A075B606 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13d-1A0A075B606 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13d-1A0A075B606 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13d-1A0A075B606 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13d-1A0A075B606 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13d-1A0A075B606 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13d-1A0A075B606 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13d-1A0A075B606 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13d-1A0A075B606 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13d-1A0A075B606 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13d-1A0A075B606 Gm27454-201ENSMUST00000185090 204 ntBASIC14.72□□□□□ -0.05
Trav13d-1A0A075B606 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13d-1A0A075B606 Gm43006-201ENSMUST00000197702 1602 ntBASIC14.72□□□□□ -0.05
Trav13d-1A0A075B606 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13d-1A0A075B606 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13d-1A0A075B606 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13d-1A0A075B606 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
Trav13d-1A0A075B606 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13d-1A0A075B606 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trav13d-1A0A075B606 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13d-1A0A075B606 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13d-1A0A075B606 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13d-1A0A075B606 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13d-1A0A075B606 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC14.71□□□□□ -0.05
Trav13d-1A0A075B606 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13d-1A0A075B606 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trav13d-1A0A075B606 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13d-1A0A075B606 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav13d-1A0A075B606 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav13d-1A0A075B606 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
Trav13d-1A0A075B606 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13d-1A0A075B606 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13d-1A0A075B606 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13d-1A0A075B606 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC14.7□□□□□ -0.06
Trav13d-1A0A075B606 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13d-1A0A075B606 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC14.7□□□□□ -0.06
Trav13d-1A0A075B606 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13d-1A0A075B606 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC14.7□□□□□ -0.06
Trav13d-1A0A075B606 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13d-1A0A075B606 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13d-1A0A075B606 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13d-1A0A075B606 Gm45417-201ENSMUST00000209533 758 ntBASIC14.7□□□□□ -0.06
Trav13d-1A0A075B606 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13d-1A0A075B606 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13d-1A0A075B606 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13d-1A0A075B606 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13d-1A0A075B606 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13d-1A0A075B606 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13d-1A0A075B606 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13d-1A0A075B606 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13d-1A0A075B606 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav13d-1A0A075B606 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav13d-1A0A075B606 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trav13d-1A0A075B606 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav13d-1A0A075B606 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav13d-1A0A075B606 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav13d-1A0A075B606 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Trav13d-1A0A075B606 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC14.69□□□□□ -0.06
Trav13d-1A0A075B606 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav13d-1A0A075B606 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav13d-1A0A075B606 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trav13d-1A0A075B606 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav13d-1A0A075B606 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav13d-1A0A075B606 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trav13d-1A0A075B606 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav13d-1A0A075B606 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC14.68□□□□□ -0.06
Trav13d-1A0A075B606 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC14.68□□□□□ -0.06
Trav13d-1A0A075B606 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13d-1A0A075B606 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13d-1A0A075B606 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13d-1A0A075B606 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13d-1A0A075B606 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trav13d-1A0A075B606 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms