Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Trav5-1A0A075B5Z7 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Trav5-1A0A075B5Z7 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav5-1A0A075B5Z7 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav5-1A0A075B5Z7 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Trav5-1A0A075B5Z7 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.42■□□□□ 0.38
Trav5-1A0A075B5Z7 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav5-1A0A075B5Z7 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Trav5-1A0A075B5Z7 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav5-1A0A075B5Z7 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav5-1A0A075B5Z7 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav5-1A0A075B5Z7 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav5-1A0A075B5Z7 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav5-1A0A075B5Z7 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav5-1A0A075B5Z7 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav5-1A0A075B5Z7 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav5-1A0A075B5Z7 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav5-1A0A075B5Z7 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Trav5-1A0A075B5Z7 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Trav5-1A0A075B5Z7 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav5-1A0A075B5Z7 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.41■□□□□ 0.38
Trav5-1A0A075B5Z7 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav5-1A0A075B5Z7 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
Trav5-1A0A075B5Z7 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav5-1A0A075B5Z7 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav5-1A0A075B5Z7 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav5-1A0A075B5Z7 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav5-1A0A075B5Z7 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.41■□□□□ 0.38
Trav5-1A0A075B5Z7 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav5-1A0A075B5Z7 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Trav5-1A0A075B5Z7 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav5-1A0A075B5Z7 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav5-1A0A075B5Z7 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.4■□□□□ 0.38
Trav5-1A0A075B5Z7 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.4■□□□□ 0.38
Trav5-1A0A075B5Z7 Mir6236-201ENSMUST00000184437 123 ntBASIC17.4■□□□□ 0.38
Trav5-1A0A075B5Z7 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.38
Trav5-1A0A075B5Z7 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Trav5-1A0A075B5Z7 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav5-1A0A075B5Z7 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.39■□□□□ 0.37
Trav5-1A0A075B5Z7 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav5-1A0A075B5Z7 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav5-1A0A075B5Z7 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.39■□□□□ 0.37
Trav5-1A0A075B5Z7 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Trav5-1A0A075B5Z7 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Trav5-1A0A075B5Z7 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.39■□□□□ 0.37
Trav5-1A0A075B5Z7 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav5-1A0A075B5Z7 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav5-1A0A075B5Z7 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav5-1A0A075B5Z7 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav5-1A0A075B5Z7 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav5-1A0A075B5Z7 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav5-1A0A075B5Z7 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trav5-1A0A075B5Z7 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav5-1A0A075B5Z7 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Trav5-1A0A075B5Z7 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.38■□□□□ 0.37
Trav5-1A0A075B5Z7 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav5-1A0A075B5Z7 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav5-1A0A075B5Z7 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
Trav5-1A0A075B5Z7 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Trav5-1A0A075B5Z7 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav5-1A0A075B5Z7 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav5-1A0A075B5Z7 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav5-1A0A075B5Z7 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Trav5-1A0A075B5Z7 Mir7075-201ENSMUST00000184187 82 ntBASIC17.37■□□□□ 0.37
Trav5-1A0A075B5Z7 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav5-1A0A075B5Z7 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Trav5-1A0A075B5Z7 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav5-1A0A075B5Z7 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav5-1A0A075B5Z7 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.36■□□□□ 0.37
Trav5-1A0A075B5Z7 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav5-1A0A075B5Z7 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav5-1A0A075B5Z7 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav5-1A0A075B5Z7 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.36■□□□□ 0.37
Trav5-1A0A075B5Z7 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav5-1A0A075B5Z7 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav5-1A0A075B5Z7 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav5-1A0A075B5Z7 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav5-1A0A075B5Z7 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav5-1A0A075B5Z7 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav5-1A0A075B5Z7 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav5-1A0A075B5Z7 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav5-1A0A075B5Z7 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav5-1A0A075B5Z7 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.35■□□□□ 0.37
Trav5-1A0A075B5Z7 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav5-1A0A075B5Z7 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav5-1A0A075B5Z7 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav5-1A0A075B5Z7 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav5-1A0A075B5Z7 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav5-1A0A075B5Z7 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav5-1A0A075B5Z7 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Trav5-1A0A075B5Z7 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav5-1A0A075B5Z7 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav5-1A0A075B5Z7 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav5-1A0A075B5Z7 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trav5-1A0A075B5Z7 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav5-1A0A075B5Z7 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
Trav5-1A0A075B5Z7 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.33■□□□□ 0.37
Trav5-1A0A075B5Z7 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav5-1A0A075B5Z7 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Trav5-1A0A075B5Z7 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms