Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Gm12419-201ENSMUST00000116649 636 ntBASIC10.87□□□□□ -0.67
Cdh17Q9R100 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC10.87□□□□□ -0.67
Cdh17Q9R100 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC10.87□□□□□ -0.67
Cdh17Q9R100 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh17Q9R100 Gm24990-201ENSMUST00000157406 323 ntBASIC10.87□□□□□ -0.67
Cdh17Q9R100 Gm24992-201ENSMUST00000157412 130 ntBASIC10.87□□□□□ -0.67
Cdh17Q9R100 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Cdh17Q9R100 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh17Q9R100 Gm7848-201ENSMUST00000210739 718 ntBASIC10.87□□□□□ -0.67
Cdh17Q9R100 Gm19208-201ENSMUST00000213861 912 ntBASIC10.87□□□□□ -0.67
Cdh17Q9R100 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC10.87□□□□□ -0.67
Cdh17Q9R100 Gm1821-202ENSMUST00000227415 750 ntBASIC10.87□□□□□ -0.67
Cdh17Q9R100 Gm9826-201ENSMUST00000029124 1299 ntBASIC10.87□□□□□ -0.67
Cdh17Q9R100 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh17Q9R100 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Cdh17Q9R100 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh17Q9R100 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh17Q9R100 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh17Q9R100 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh17Q9R100 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh17Q9R100 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh17Q9R100 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cdh17Q9R100 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh17Q9R100 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh17Q9R100 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh17Q9R100 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Cdh17Q9R100 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh17Q9R100 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh17Q9R100 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh17Q9R100 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh17Q9R100 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.87□□□□□ -0.67
Cdh17Q9R100 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh17Q9R100 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh17Q9R100 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh17Q9R100 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh17Q9R100 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh17Q9R100 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh17Q9R100 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh17Q9R100 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh17Q9R100 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh17Q9R100 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh17Q9R100 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh17Q9R100 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Cdh17Q9R100 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Cdh17Q9R100 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Cdh17Q9R100 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC10.86□□□□□ -0.67
Cdh17Q9R100 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh17Q9R100 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh17Q9R100 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Cdh17Q9R100 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Cdh17Q9R100 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh17Q9R100 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh17Q9R100 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh17Q9R100 AC166836.1-201ENSMUST00000219933 1795 ntBASIC10.86□□□□□ -0.67
Cdh17Q9R100 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh17Q9R100 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh17Q9R100 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh17Q9R100 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC10.86□□□□□ -0.67
Cdh17Q9R100 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh17Q9R100 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh17Q9R100 Gm7857-201ENSMUST00000117957 358 ntBASIC10.86□□□□□ -0.67
Cdh17Q9R100 Gm16219-201ENSMUST00000120096 274 ntBASIC10.86□□□□□ -0.67
Cdh17Q9R100 Gm13328-201ENSMUST00000120816 1020 ntBASIC10.86□□□□□ -0.67
Cdh17Q9R100 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC10.86□□□□□ -0.67
Cdh17Q9R100 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC10.86□□□□□ -0.67
Cdh17Q9R100 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh17Q9R100 Gm27441-201ENSMUST00000185000 105 ntBASIC10.86□□□□□ -0.67
Cdh17Q9R100 Gm37284-201ENSMUST00000193607 539 ntBASIC10.86□□□□□ -0.67
Cdh17Q9R100 Gm37981-201ENSMUST00000194280 535 ntBASIC10.86□□□□□ -0.67
Cdh17Q9R100 Gm38321-201ENSMUST00000195053 235 ntBASIC10.86□□□□□ -0.67
Cdh17Q9R100 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC10.86□□□□□ -0.67
Cdh17Q9R100 Gm43852-201ENSMUST00000202098 917 ntBASIC10.86□□□□□ -0.67
Cdh17Q9R100 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Cdh17Q9R100 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC10.86□□□□□ -0.67
Cdh17Q9R100 Abhd11os-203ENSMUST00000222613 363 ntBASIC10.86□□□□□ -0.67
Cdh17Q9R100 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC10.86□□□□□ -0.67
Cdh17Q9R100 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Cdh17Q9R100 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Cdh17Q9R100 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh17Q9R100 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh17Q9R100 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh17Q9R100 Gm45165-201ENSMUST00000207763 1631 ntBASIC10.86□□□□□ -0.67
Cdh17Q9R100 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC10.86□□□□□ -0.67
Cdh17Q9R100 Gm5822-201ENSMUST00000161562 1378 ntBASIC10.86□□□□□ -0.67
Cdh17Q9R100 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh17Q9R100 AC154171.2-201ENSMUST00000225219 2652 ntBASIC10.86□□□□□ -0.67
Cdh17Q9R100 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC10.86□□□□□ -0.67
Cdh17Q9R100 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh17Q9R100 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh17Q9R100 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Cdh17Q9R100 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh17Q9R100 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdh17Q9R100 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Cdh17Q9R100 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh17Q9R100 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh17Q9R100 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
Cdh17Q9R100 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh17Q9R100 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Cdh17Q9R100 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdh17Q9R100 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms