Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gtf3c6Q9D8P7 3930402G23Rik-201ENSMUST00000040608 3086 ntTSL 2 BASIC12.16□□□□□ -0.46
Gtf3c6Q9D8P7 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gtf3c6Q9D8P7 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gtf3c6Q9D8P7 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Gtf3c6Q9D8P7 Gm15236-201ENSMUST00000117309 379 ntBASIC12.16□□□□□ -0.46
Gtf3c6Q9D8P7 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.16□□□□□ -0.46
Gtf3c6Q9D8P7 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.16□□□□□ -0.46
Gtf3c6Q9D8P7 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.16□□□□□ -0.46
Gtf3c6Q9D8P7 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gtf3c6Q9D8P7 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Gtf3c6Q9D8P7 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.16□□□□□ -0.46
Gtf3c6Q9D8P7 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gtf3c6Q9D8P7 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC12.16□□□□□ -0.46
Gtf3c6Q9D8P7 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Gtf3c6Q9D8P7 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gtf3c6Q9D8P7 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.16□□□□□ -0.46
Gtf3c6Q9D8P7 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Gtf3c6Q9D8P7 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gtf3c6Q9D8P7 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gtf3c6Q9D8P7 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gtf3c6Q9D8P7 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gtf3c6Q9D8P7 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gtf3c6Q9D8P7 Myadm-201ENSMUST00000096744 2814 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gtf3c6Q9D8P7 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Gtf3c6Q9D8P7 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.16□□□□□ -0.46
Gtf3c6Q9D8P7 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Gtf3c6Q9D8P7 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gtf3c6Q9D8P7 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gtf3c6Q9D8P7 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gtf3c6Q9D8P7 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gtf3c6Q9D8P7 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gtf3c6Q9D8P7 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gtf3c6Q9D8P7 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gtf3c6Q9D8P7 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gtf3c6Q9D8P7 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gtf3c6Q9D8P7 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gtf3c6Q9D8P7 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gtf3c6Q9D8P7 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gtf3c6Q9D8P7 St5-204ENSMUST00000168005 3004 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Gtf3c6Q9D8P7 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gtf3c6Q9D8P7 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gtf3c6Q9D8P7 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Gtf3c6Q9D8P7 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC12.15□□□□□ -0.46
Gtf3c6Q9D8P7 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gtf3c6Q9D8P7 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Gtf3c6Q9D8P7 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Gtf3c6Q9D8P7 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gtf3c6Q9D8P7 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC12.15□□□□□ -0.46
Gtf3c6Q9D8P7 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gtf3c6Q9D8P7 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gtf3c6Q9D8P7 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gtf3c6Q9D8P7 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gtf3c6Q9D8P7 Cntrob-201ENSMUST00000092973 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gtf3c6Q9D8P7 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Gtf3c6Q9D8P7 Nudt13-207ENSMUST00000224311 1574 ntBASIC12.15□□□□□ -0.46
Gtf3c6Q9D8P7 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Gtf3c6Q9D8P7 Dlgap2-208ENSMUST00000150247 3138 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Gtf3c6Q9D8P7 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gtf3c6Q9D8P7 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Gtf3c6Q9D8P7 Gm22920-201ENSMUST00000102175 109 ntBASIC12.15□□□□□ -0.46
Gtf3c6Q9D8P7 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Gtf3c6Q9D8P7 Gm4294-201ENSMUST00000105169 614 ntBASIC12.15□□□□□ -0.46
Gtf3c6Q9D8P7 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gtf3c6Q9D8P7 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.15□□□□□ -0.46
Gtf3c6Q9D8P7 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Gtf3c6Q9D8P7 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.15□□□□□ -0.46
Gtf3c6Q9D8P7 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.15□□□□□ -0.46
Gtf3c6Q9D8P7 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Gtf3c6Q9D8P7 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.46
Gtf3c6Q9D8P7 Olfml3-204ENSMUST00000169286 874 ntBASIC12.15□□□□□ -0.46
Gtf3c6Q9D8P7 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.15□□□□□ -0.46
Gtf3c6Q9D8P7 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Gtf3c6Q9D8P7 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gtf3c6Q9D8P7 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.15□□□□□ -0.46
Gtf3c6Q9D8P7 Gm37835-201ENSMUST00000193305 361 ntBASIC12.15□□□□□ -0.46
Gtf3c6Q9D8P7 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC12.15□□□□□ -0.46
Gtf3c6Q9D8P7 Gm7183-201ENSMUST00000213870 1005 ntBASIC12.15□□□□□ -0.46
Gtf3c6Q9D8P7 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gtf3c6Q9D8P7 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Gtf3c6Q9D8P7 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Gtf3c6Q9D8P7 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Gtf3c6Q9D8P7 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gtf3c6Q9D8P7 Folh1-202ENSMUST00000107271 2516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gtf3c6Q9D8P7 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gtf3c6Q9D8P7 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gtf3c6Q9D8P7 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gtf3c6Q9D8P7 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.15□□□□□ -0.46
Gtf3c6Q9D8P7 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Gtf3c6Q9D8P7 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Gtf3c6Q9D8P7 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gtf3c6Q9D8P7 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gtf3c6Q9D8P7 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC12.14□□□□□ -0.47
Gtf3c6Q9D8P7 Taf8-201ENSMUST00000067103 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gtf3c6Q9D8P7 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gtf3c6Q9D8P7 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gtf3c6Q9D8P7 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gtf3c6Q9D8P7 Trak1-211ENSMUST00000211187 4043 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Gtf3c6Q9D8P7 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC12.14□□□□□ -0.47
Gtf3c6Q9D8P7 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms