Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Usp11Q99K46 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Usp11Q99K46 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Usp11Q99K46 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Usp11Q99K46 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Usp11Q99K46 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC11.79□□□□□ -0.52
Usp11Q99K46 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Usp11Q99K46 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Usp11Q99K46 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Usp11Q99K46 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Usp11Q99K46 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Usp11Q99K46 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Usp11Q99K46 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Usp11Q99K46 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Usp11Q99K46 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.78□□□□□ -0.52
Usp11Q99K46 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Usp11Q99K46 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Usp11Q99K46 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Usp11Q99K46 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.78□□□□□ -0.52
Usp11Q99K46 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Usp11Q99K46 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Usp11Q99K46 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Usp11Q99K46 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.78□□□□□ -0.52
Usp11Q99K46 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Usp11Q99K46 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC11.78□□□□□ -0.52
Usp11Q99K46 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Usp11Q99K46 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Usp11Q99K46 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC11.78□□□□□ -0.52
Usp11Q99K46 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Usp11Q99K46 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Usp11Q99K46 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Usp11Q99K46 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Usp11Q99K46 Gm5703-201ENSMUST00000186658 3973 ntBASIC11.78□□□□□ -0.52
Usp11Q99K46 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Usp11Q99K46 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Usp11Q99K46 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Usp11Q99K46 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Usp11Q99K46 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Usp11Q99K46 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Usp11Q99K46 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC11.78□□□□□ -0.52
Usp11Q99K46 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC11.78□□□□□ -0.52
Usp11Q99K46 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Usp11Q99K46 Gm13611-201ENSMUST00000118269 318 ntBASIC11.78□□□□□ -0.52
Usp11Q99K46 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Usp11Q99K46 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.78□□□□□ -0.52
Usp11Q99K46 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Usp11Q99K46 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Usp11Q99K46 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.78□□□□□ -0.52
Usp11Q99K46 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Usp11Q99K46 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Usp11Q99K46 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Usp11Q99K46 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Usp11Q99K46 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Usp11Q99K46 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Usp11Q99K46 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Usp11Q99K46 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Usp11Q99K46 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC11.78□□□□□ -0.52
Usp11Q99K46 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Usp11Q99K46 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Usp11Q99K46 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Usp11Q99K46 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Usp11Q99K46 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Usp11Q99K46 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Usp11Q99K46 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Usp11Q99K46 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC11.77□□□□□ -0.52
Usp11Q99K46 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC11.77□□□□□ -0.52
Usp11Q99K46 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Usp11Q99K46 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Usp11Q99K46 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Usp11Q99K46 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Usp11Q99K46 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Usp11Q99K46 Gm19040-201ENSMUST00000203280 4726 ntBASIC11.77□□□□□ -0.52
Usp11Q99K46 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Usp11Q99K46 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Usp11Q99K46 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Usp11Q99K46 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.77□□□□□ -0.52
Usp11Q99K46 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Usp11Q99K46 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Usp11Q99K46 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Usp11Q99K46 CT025681.1-201ENSMUST00000225453 1855 ntBASIC11.77□□□□□ -0.53
Usp11Q99K46 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Usp11Q99K46 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Usp11Q99K46 Gm22920-201ENSMUST00000102175 109 ntBASIC11.77□□□□□ -0.53
Usp11Q99K46 Gm22711-201ENSMUST00000116890 133 ntBASIC11.77□□□□□ -0.53
Usp11Q99K46 Gm13408-201ENSMUST00000119822 798 ntBASIC11.77□□□□□ -0.53
Usp11Q99K46 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.77□□□□□ -0.53
Usp11Q99K46 Gm13935-201ENSMUST00000121859 798 ntBASIC11.77□□□□□ -0.53
Usp11Q99K46 Gm10051-201ENSMUST00000145209 414 ntBASIC11.77□□□□□ -0.53
Usp11Q99K46 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Usp11Q99K46 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.77□□□□□ -0.53
Usp11Q99K46 Gm24844-201ENSMUST00000158679 127 ntBASIC11.77□□□□□ -0.53
Usp11Q99K46 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Usp11Q99K46 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.77□□□□□ -0.53
Usp11Q99K46 Gm12407-201ENSMUST00000180219 324 ntBASIC11.77□□□□□ -0.53
Usp11Q99K46 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Usp11Q99K46 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.77□□□□□ -0.53
Usp11Q99K46 Gm18393-201ENSMUST00000208349 1131 ntBASIC11.77□□□□□ -0.53
Usp11Q99K46 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Usp11Q99K46 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC11.77□□□□□ -0.53
Usp11Q99K46 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms