Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Park2-209ENSMUST00000191124 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 Anapc15-213ENSMUST00000178851 2797 ntTSL 2 BASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 Cr1l-204ENSMUST00000193094 2776 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 Oprm1-216ENSMUST00000105611 2420 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 Gm37003-201ENSMUST00000194702 2827 ntBASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 Rhox2-ps-201ENSMUST00000117421 322 ntBASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 Gm11783-201ENSMUST00000119549 885 ntBASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 Gm13829-201ENSMUST00000119600 138 ntBASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 Gm37424-201ENSMUST00000191727 561 ntBASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 Gm9353-201ENSMUST00000200472 604 ntBASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 Gm9823-201ENSMUST00000051212 327 ntBASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 Gm26724-201ENSMUST00000180434 1650 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 AC154849.3-201ENSMUST00000223733 1660 ntBASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 Kalrn-203ENSMUST00000114947 2922 ntTSL 5 BASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 Gm13437-201ENSMUST00000122434 1981 ntBASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 Nipal3-202ENSMUST00000105856 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc28bQ8CEG5 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ccdc28bQ8CEG5 Gm43086-201ENSMUST00000202536 2657 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Ccdc28bQ8CEG5 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Ccdc28bQ8CEG5 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ccdc28bQ8CEG5 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ccdc28bQ8CEG5 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Ccdc28bQ8CEG5 Myom2-201ENSMUST00000033842 5075 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ccdc28bQ8CEG5 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Ccdc28bQ8CEG5 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ccdc28bQ8CEG5 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ccdc28bQ8CEG5 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ccdc28bQ8CEG5 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Ccdc28bQ8CEG5 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Ccdc28bQ8CEG5 Gm26772-201ENSMUST00000180466 3429 ntTSL 5 BASIC11.02□□□□□ -0.64
Ccdc28bQ8CEG5 Klhl22-202ENSMUST00000120488 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc28bQ8CEG5 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Ccdc28bQ8CEG5 Gm16387-201ENSMUST00000180990 2632 ntBASIC11.02□□□□□ -0.65
Ccdc28bQ8CEG5 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc28bQ8CEG5 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc28bQ8CEG5 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.02□□□□□ -0.65
Ccdc28bQ8CEG5 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC11.02□□□□□ -0.65
Ccdc28bQ8CEG5 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Ccdc28bQ8CEG5 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.02□□□□□ -0.65
Ccdc28bQ8CEG5 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.02□□□□□ -0.65
Ccdc28bQ8CEG5 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC11.02□□□□□ -0.65
Ccdc28bQ8CEG5 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.02□□□□□ -0.65
Ccdc28bQ8CEG5 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc28bQ8CEG5 Gm38321-201ENSMUST00000195053 235 ntBASIC11.02□□□□□ -0.65
Ccdc28bQ8CEG5 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc28bQ8CEG5 Gm18054-201ENSMUST00000207539 555 ntBASIC11.02□□□□□ -0.65
Ccdc28bQ8CEG5 Gm18935-201ENSMUST00000212692 664 ntBASIC11.02□□□□□ -0.65
Ccdc28bQ8CEG5 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.02□□□□□ -0.65
Ccdc28bQ8CEG5 Gm4978-201ENSMUST00000071565 801 ntBASIC11.02□□□□□ -0.65
Ccdc28bQ8CEG5 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc28bQ8CEG5 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Ccdc28bQ8CEG5 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc28bQ8CEG5 Sdhc-202ENSMUST00000111336 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc28bQ8CEG5 Mfsd2b-201ENSMUST00000045921 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc28bQ8CEG5 Gpr35-202ENSMUST00000064480 3409 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc28bQ8CEG5 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc28bQ8CEG5 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc28bQ8CEG5 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC11.02□□□□□ -0.65
Ccdc28bQ8CEG5 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
Ccdc28bQ8CEG5 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Ccdc28bQ8CEG5 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc28bQ8CEG5 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms