Protein–RNA interactions for Protein: Q8CCH2

Nhlrc3, NHL repeat-containing protein 3, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc3Q8CCH2 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 Ccdc136-202ENSMUST00000115275 3279 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 Exoc4-202ENSMUST00000090381 2598 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 Gm12196-201ENSMUST00000120954 262 ntBASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 Gm25668-201ENSMUST00000157700 129 ntBASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 Gm17376-201ENSMUST00000166016 84 ntBASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 Gm2965-201ENSMUST00000198365 343 ntBASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 Gm5869-201ENSMUST00000200248 1257 ntBASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 Gm42867-201ENSMUST00000202995 469 ntBASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 AC164437.3-201ENSMUST00000228323 347 ntBASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 AC149588.2-201ENSMUST00000228182 1859 ntBASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Nhlrc3Q8CCH2 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Tmem30c-203ENSMUST00000120112 3478 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Idua-202ENSMUST00000112563 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Zbtb25-202ENSMUST00000176102 2707 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Gm14130-201ENSMUST00000118417 987 ntBASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Gm18734-201ENSMUST00000172937 808 ntBASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Gm8100-201ENSMUST00000182906 988 ntBASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 AC154319.1-201ENSMUST00000216330 312 ntBASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 AL589735.1-201ENSMUST00000224353 270 ntBASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 AC133602.1-201ENSMUST00000227510 509 ntBASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nhlrc3Q8CCH2 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms