Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh19Q80TF3 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh19Q80TF3 Gm8197-202ENSMUST00000193422 934 ntBASIC11.04□□□□□ -0.64
Pcdh19Q80TF3 Gm9884-201ENSMUST00000194343 1222 ntBASIC11.04□□□□□ -0.64
Pcdh19Q80TF3 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC11.04□□□□□ -0.64
Pcdh19Q80TF3 Gm43671-201ENSMUST00000200422 433 ntBASIC11.04□□□□□ -0.64
Pcdh19Q80TF3 Gm9353-201ENSMUST00000200472 604 ntBASIC11.04□□□□□ -0.64
Pcdh19Q80TF3 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh19Q80TF3 Gm45410-201ENSMUST00000211331 1093 ntBASIC11.04□□□□□ -0.64
Pcdh19Q80TF3 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC11.04□□□□□ -0.64
Pcdh19Q80TF3 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC11.04□□□□□ -0.64
Pcdh19Q80TF3 Olfr128-201ENSMUST00000080231 1050 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Pcdh19Q80TF3 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh19Q80TF3 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh19Q80TF3 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh19Q80TF3 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Pcdh19Q80TF3 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.04□□□□□ -0.64
Pcdh19Q80TF3 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Pcdh19Q80TF3 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh19Q80TF3 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.04□□□□□ -0.64
Pcdh19Q80TF3 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh19Q80TF3 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh19Q80TF3 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Pcdh19Q80TF3 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh19Q80TF3 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.04□□□□□ -0.64
Pcdh19Q80TF3 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.04□□□□□ -0.64
Pcdh19Q80TF3 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh19Q80TF3 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh19Q80TF3 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh19Q80TF3 Gm17213-201ENSMUST00000165161 1360 ntBASIC11.03□□□□□ -0.64
Pcdh19Q80TF3 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Pcdh19Q80TF3 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh19Q80TF3 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh19Q80TF3 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh19Q80TF3 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh19Q80TF3 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh19Q80TF3 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Pcdh19Q80TF3 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Pcdh19Q80TF3 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh19Q80TF3 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh19Q80TF3 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.03□□□□□ -0.64
Pcdh19Q80TF3 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Pcdh19Q80TF3 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh19Q80TF3 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh19Q80TF3 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh19Q80TF3 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh19Q80TF3 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh19Q80TF3 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Pcdh19Q80TF3 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Pcdh19Q80TF3 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh19Q80TF3 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC11.03□□□□□ -0.64
Pcdh19Q80TF3 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC11.03□□□□□ -0.64
Pcdh19Q80TF3 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
Pcdh19Q80TF3 Gm3671-201ENSMUST00000182463 1007 ntBASIC11.03□□□□□ -0.64
Pcdh19Q80TF3 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC11.03□□□□□ -0.64
Pcdh19Q80TF3 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
Pcdh19Q80TF3 Gm5599-201ENSMUST00000209602 788 ntBASIC11.03□□□□□ -0.64
Pcdh19Q80TF3 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC11.03□□□□□ -0.64
Pcdh19Q80TF3 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
Pcdh19Q80TF3 AC153152.3-201ENSMUST00000222188 1135 ntBASIC11.03□□□□□ -0.64
Pcdh19Q80TF3 AC159002.1-201ENSMUST00000226714 924 ntBASIC11.03□□□□□ -0.64
Pcdh19Q80TF3 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh19Q80TF3 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.03□□□□□ -0.64
Pcdh19Q80TF3 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh19Q80TF3 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh19Q80TF3 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh19Q80TF3 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh19Q80TF3 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh19Q80TF3 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh19Q80TF3 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.03□□□□□ -0.64
Pcdh19Q80TF3 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh19Q80TF3 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh19Q80TF3 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC11.03□□□□□ -0.64
Pcdh19Q80TF3 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh19Q80TF3 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Pcdh19Q80TF3 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh19Q80TF3 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Pcdh19Q80TF3 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pcdh19Q80TF3 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
Pcdh19Q80TF3 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Pcdh19Q80TF3 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pcdh19Q80TF3 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pcdh19Q80TF3 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Pcdh19Q80TF3 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh19Q80TF3 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh19Q80TF3 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh19Q80TF3 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC11.02□□□□□ -0.65
Pcdh19Q80TF3 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh19Q80TF3 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh19Q80TF3 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh19Q80TF3 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh19Q80TF3 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.02□□□□□ -0.65
Pcdh19Q80TF3 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC11.02□□□□□ -0.65
Pcdh19Q80TF3 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Pcdh19Q80TF3 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh19Q80TF3 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Pcdh19Q80TF3 Gm25554-201ENSMUST00000158075 113 ntBASIC11.02□□□□□ -0.65
Pcdh19Q80TF3 Gm19246-201ENSMUST00000173599 255 ntBASIC11.02□□□□□ -0.65
Pcdh19Q80TF3 AC238811.4-201ENSMUST00000178019 1246 ntBASIC11.02□□□□□ -0.65
Pcdh19Q80TF3 AC238940.3-201ENSMUST00000178830 1246 ntBASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms