Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 Gm43334-201ENSMUST00000197740 1318 ntBASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Pcdh8Q7TSK3 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh8Q7TSK3 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh8Q7TSK3 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh8Q7TSK3 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh8Q7TSK3 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Pcdh8Q7TSK3 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh8Q7TSK3 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.05□□□□□ -0.64
Pcdh8Q7TSK3 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Pcdh8Q7TSK3 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh8Q7TSK3 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh8Q7TSK3 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh8Q7TSK3 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Pcdh8Q7TSK3 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh8Q7TSK3 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Pcdh8Q7TSK3 Gm15197-201ENSMUST00000120526 478 ntBASIC11.05□□□□□ -0.64
Pcdh8Q7TSK3 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Pcdh8Q7TSK3 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Pcdh8Q7TSK3 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Pcdh8Q7TSK3 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC11.05□□□□□ -0.64
Pcdh8Q7TSK3 Gm37638-201ENSMUST00000194337 1123 ntBASIC11.05□□□□□ -0.64
Pcdh8Q7TSK3 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC11.05□□□□□ -0.64
Pcdh8Q7TSK3 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC11.05□□□□□ -0.64
Pcdh8Q7TSK3 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.05□□□□□ -0.64
Pcdh8Q7TSK3 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.05□□□□□ -0.64
Pcdh8Q7TSK3 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Pcdh8Q7TSK3 CT025602.2-201ENSMUST00000226553 772 ntBASIC11.05□□□□□ -0.64
Pcdh8Q7TSK3 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Pcdh8Q7TSK3 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh8Q7TSK3 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Pcdh8Q7TSK3 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh8Q7TSK3 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh8Q7TSK3 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh8Q7TSK3 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.05□□□□□ -0.64
Pcdh8Q7TSK3 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh8Q7TSK3 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Pcdh8Q7TSK3 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Pcdh8Q7TSK3 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh8Q7TSK3 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh8Q7TSK3 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Pcdh8Q7TSK3 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Pcdh8Q7TSK3 Gm17213-201ENSMUST00000165161 1360 ntBASIC11.04□□□□□ -0.64
Pcdh8Q7TSK3 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
Pcdh8Q7TSK3 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh8Q7TSK3 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh8Q7TSK3 Gm18294-201ENSMUST00000176980 1748 ntBASIC11.04□□□□□ -0.64
Pcdh8Q7TSK3 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh8Q7TSK3 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh8Q7TSK3 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
Pcdh8Q7TSK3 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Pcdh8Q7TSK3 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh8Q7TSK3 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh8Q7TSK3 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Pcdh8Q7TSK3 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh8Q7TSK3 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh8Q7TSK3 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC11.04□□□□□ -0.64
Pcdh8Q7TSK3 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh8Q7TSK3 Gm24992-201ENSMUST00000157412 130 ntBASIC11.04□□□□□ -0.64
Pcdh8Q7TSK3 Gm23218-201ENSMUST00000158124 276 ntBASIC11.04□□□□□ -0.64
Pcdh8Q7TSK3 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC11.04□□□□□ -0.64
Pcdh8Q7TSK3 AC238811.4-201ENSMUST00000178019 1246 ntBASIC11.04□□□□□ -0.64
Pcdh8Q7TSK3 AC238940.3-201ENSMUST00000178830 1246 ntBASIC11.04□□□□□ -0.64
Pcdh8Q7TSK3 Gm9884-201ENSMUST00000194343 1222 ntBASIC11.04□□□□□ -0.64
Pcdh8Q7TSK3 Gm42655-201ENSMUST00000202782 1134 ntBASIC11.04□□□□□ -0.64
Pcdh8Q7TSK3 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh8Q7TSK3 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh8Q7TSK3 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC11.04□□□□□ -0.64
Pcdh8Q7TSK3 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Pcdh8Q7TSK3 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh8Q7TSK3 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh8Q7TSK3 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.04□□□□□ -0.64
Pcdh8Q7TSK3 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh8Q7TSK3 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh8Q7TSK3 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh8Q7TSK3 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh8Q7TSK3 Pdgfra-202ENSMUST00000168162 6834 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh8Q7TSK3 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh8Q7TSK3 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Pcdh8Q7TSK3 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC11.04□□□□□ -0.64
Pcdh8Q7TSK3 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Pcdh8Q7TSK3 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh8Q7TSK3 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh8Q7TSK3 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh8Q7TSK3 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh8Q7TSK3 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Pcdh8Q7TSK3 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh8Q7TSK3 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh8Q7TSK3 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms