Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Gm8320-201ENSMUST00000177584 1762 ntBASIC11.26□□□□□ -0.61
Rad54bQ6PFE3 Gm8303-201ENSMUST00000178371 1762 ntBASIC11.26□□□□□ -0.61
Rad54bQ6PFE3 Gm8331-201ENSMUST00000178433 1762 ntBASIC11.26□□□□□ -0.61
Rad54bQ6PFE3 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rad54bQ6PFE3 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rad54bQ6PFE3 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rad54bQ6PFE3 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.25□□□□□ -0.61
Rad54bQ6PFE3 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rad54bQ6PFE3 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rad54bQ6PFE3 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rad54bQ6PFE3 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Rad54bQ6PFE3 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rad54bQ6PFE3 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rad54bQ6PFE3 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Rad54bQ6PFE3 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC11.25□□□□□ -0.61
Rad54bQ6PFE3 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rad54bQ6PFE3 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rad54bQ6PFE3 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rad54bQ6PFE3 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rad54bQ6PFE3 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.25□□□□□ -0.61
Rad54bQ6PFE3 Gm8302-201ENSMUST00000119217 852 ntBASIC11.25□□□□□ -0.61
Rad54bQ6PFE3 Gm16219-201ENSMUST00000120096 274 ntBASIC11.25□□□□□ -0.61
Rad54bQ6PFE3 Gm9089-201ENSMUST00000122027 526 ntBASIC11.25□□□□□ -0.61
Rad54bQ6PFE3 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Rad54bQ6PFE3 Gm25226-201ENSMUST00000158198 123 ntBASIC11.25□□□□□ -0.61
Rad54bQ6PFE3 Gm23694-201ENSMUST00000179335 110 ntBASIC11.25□□□□□ -0.61
Rad54bQ6PFE3 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rad54bQ6PFE3 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Rad54bQ6PFE3 Gm43186-201ENSMUST00000198130 824 ntBASIC11.25□□□□□ -0.61
Rad54bQ6PFE3 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.25□□□□□ -0.61
Rad54bQ6PFE3 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rad54bQ6PFE3 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rad54bQ6PFE3 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rad54bQ6PFE3 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rad54bQ6PFE3 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rad54bQ6PFE3 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Rad54bQ6PFE3 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.25□□□□□ -0.61
Rad54bQ6PFE3 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rad54bQ6PFE3 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rad54bQ6PFE3 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Rad54bQ6PFE3 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rad54bQ6PFE3 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rad54bQ6PFE3 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rad54bQ6PFE3 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Rad54bQ6PFE3 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rad54bQ6PFE3 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rad54bQ6PFE3 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rad54bQ6PFE3 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rad54bQ6PFE3 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rad54bQ6PFE3 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rad54bQ6PFE3 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Rad54bQ6PFE3 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rad54bQ6PFE3 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC11.24□□□□□ -0.61
Rad54bQ6PFE3 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rad54bQ6PFE3 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rad54bQ6PFE3 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rad54bQ6PFE3 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.24□□□□□ -0.61
Rad54bQ6PFE3 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rad54bQ6PFE3 Gm22920-201ENSMUST00000102175 109 ntBASIC11.24□□□□□ -0.61
Rad54bQ6PFE3 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rad54bQ6PFE3 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.24□□□□□ -0.61
Rad54bQ6PFE3 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.24□□□□□ -0.61
Rad54bQ6PFE3 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
Rad54bQ6PFE3 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.24□□□□□ -0.61
Rad54bQ6PFE3 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.24□□□□□ -0.61
Rad54bQ6PFE3 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC11.24□□□□□ -0.61
Rad54bQ6PFE3 Gm8574-201ENSMUST00000203207 924 ntBASIC11.24□□□□□ -0.61
Rad54bQ6PFE3 Gm19208-201ENSMUST00000213861 912 ntBASIC11.24□□□□□ -0.61
Rad54bQ6PFE3 Gm2517-201ENSMUST00000215651 348 ntBASIC11.24□□□□□ -0.61
Rad54bQ6PFE3 Gm9111-201ENSMUST00000219394 709 ntBASIC11.24□□□□□ -0.61
Rad54bQ6PFE3 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rad54bQ6PFE3 Abhd11os-203ENSMUST00000222613 363 ntBASIC11.24□□□□□ -0.61
Rad54bQ6PFE3 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.24□□□□□ -0.61
Rad54bQ6PFE3 AC154436.1-201ENSMUST00000227272 782 ntBASIC11.24□□□□□ -0.61
Rad54bQ6PFE3 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rad54bQ6PFE3 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rad54bQ6PFE3 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rad54bQ6PFE3 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rad54bQ6PFE3 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Rad54bQ6PFE3 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rad54bQ6PFE3 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rad54bQ6PFE3 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rad54bQ6PFE3 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rad54bQ6PFE3 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.24□□□□□ -0.61
Rad54bQ6PFE3 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Rad54bQ6PFE3 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
Rad54bQ6PFE3 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC11.24□□□□□ -0.61
Rad54bQ6PFE3 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.24□□□□□ -0.61
Rad54bQ6PFE3 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rad54bQ6PFE3 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC11.24□□□□□ -0.61
Rad54bQ6PFE3 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rad54bQ6PFE3 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rad54bQ6PFE3 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC11.24□□□□□ -0.61
Rad54bQ6PFE3 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rad54bQ6PFE3 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rad54bQ6PFE3 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rad54bQ6PFE3 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms