Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Gm43058-201ENSMUST00000197645 625 ntBASIC13.06□□□□□ -0.32
Smarcc2Q6PDG5 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC13.06□□□□□ -0.32
Smarcc2Q6PDG5 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcc2Q6PDG5 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcc2Q6PDG5 Gm23105-201ENSMUST00000083719 134 ntBASIC13.06□□□□□ -0.32
Smarcc2Q6PDG5 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcc2Q6PDG5 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
Smarcc2Q6PDG5 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcc2Q6PDG5 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcc2Q6PDG5 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcc2Q6PDG5 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcc2Q6PDG5 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcc2Q6PDG5 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC13.06□□□□□ -0.32
Smarcc2Q6PDG5 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcc2Q6PDG5 Gm9244-201ENSMUST00000056767 2129 ntBASIC13.06□□□□□ -0.32
Smarcc2Q6PDG5 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcc2Q6PDG5 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcc2Q6PDG5 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcc2Q6PDG5 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcc2Q6PDG5 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcc2Q6PDG5 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Smarcc2Q6PDG5 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC13.05□□□□□ -0.32
Smarcc2Q6PDG5 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcc2Q6PDG5 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcc2Q6PDG5 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcc2Q6PDG5 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcc2Q6PDG5 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcc2Q6PDG5 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcc2Q6PDG5 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcc2Q6PDG5 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcc2Q6PDG5 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcc2Q6PDG5 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcc2Q6PDG5 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Smarcc2Q6PDG5 AC122291.1-201ENSMUST00000228937 5748 ntBASIC13.05□□□□□ -0.32
Smarcc2Q6PDG5 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcc2Q6PDG5 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Smarcc2Q6PDG5 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Smarcc2Q6PDG5 Gm14665-201ENSMUST00000122294 557 ntBASIC13.05□□□□□ -0.32
Smarcc2Q6PDG5 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcc2Q6PDG5 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC13.05□□□□□ -0.32
Smarcc2Q6PDG5 Gm19246-201ENSMUST00000173599 255 ntBASIC13.05□□□□□ -0.32
Smarcc2Q6PDG5 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcc2Q6PDG5 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcc2Q6PDG5 D9Wsu149-201ENSMUST00000214169 594 ntBASIC13.05□□□□□ -0.32
Smarcc2Q6PDG5 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC13.05□□□□□ -0.32
Smarcc2Q6PDG5 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcc2Q6PDG5 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcc2Q6PDG5 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Smarcc2Q6PDG5 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Smarcc2Q6PDG5 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcc2Q6PDG5 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC13.05□□□□□ -0.32
Smarcc2Q6PDG5 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcc2Q6PDG5 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcc2Q6PDG5 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcc2Q6PDG5 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcc2Q6PDG5 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcc2Q6PDG5 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcc2Q6PDG5 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcc2Q6PDG5 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Smarcc2Q6PDG5 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Smarcc2Q6PDG5 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC13.04□□□□□ -0.32
Smarcc2Q6PDG5 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Smarcc2Q6PDG5 AC154314.2-201ENSMUST00000223677 3502 ntBASIC13.04□□□□□ -0.32
Smarcc2Q6PDG5 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcc2Q6PDG5 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcc2Q6PDG5 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcc2Q6PDG5 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC13.04□□□□□ -0.32
Smarcc2Q6PDG5 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcc2Q6PDG5 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcc2Q6PDG5 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcc2Q6PDG5 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcc2Q6PDG5 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcc2Q6PDG5 Gm14942-201ENSMUST00000119642 336 ntBASIC13.04□□□□□ -0.32
Smarcc2Q6PDG5 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC13.04□□□□□ -0.32
Smarcc2Q6PDG5 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC13.04□□□□□ -0.32
Smarcc2Q6PDG5 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC13.04□□□□□ -0.32
Smarcc2Q6PDG5 Gm23694-201ENSMUST00000179335 110 ntBASIC13.04□□□□□ -0.32
Smarcc2Q6PDG5 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC13.04□□□□□ -0.32
Smarcc2Q6PDG5 Gm43520-201ENSMUST00000197996 164 ntBASIC13.04□□□□□ -0.32
Smarcc2Q6PDG5 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC13.04□□□□□ -0.32
Smarcc2Q6PDG5 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcc2Q6PDG5 Gm21358-201ENSMUST00000191645 1659 ntBASIC13.04□□□□□ -0.32
Smarcc2Q6PDG5 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcc2Q6PDG5 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcc2Q6PDG5 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcc2Q6PDG5 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcc2Q6PDG5 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Smarcc2Q6PDG5 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcc2Q6PDG5 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC13.04□□□□□ -0.32
Smarcc2Q6PDG5 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcc2Q6PDG5 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcc2Q6PDG5 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcc2Q6PDG5 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcc2Q6PDG5 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Smarcc2Q6PDG5 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Smarcc2Q6PDG5 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcc2Q6PDG5 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcc2Q6PDG5 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smarcc2Q6PDG5 AC153506.1-201ENSMUST00000218768 2915 ntBASIC13.03□□□□□ -0.32
Smarcc2Q6PDG5 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms