Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 Gm37031-201ENSMUST00000195487 2530 ntBASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Smarcd3Q6P9Z1 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Gm15236-201ENSMUST00000117309 379 ntBASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Gm13263-201ENSMUST00000121271 838 ntBASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 H2-Q3-201ENSMUST00000172583 608 ntBASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Gm4819-201ENSMUST00000182170 1009 ntBASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Gm18730-201ENSMUST00000218038 343 ntBASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 AC156501.1-201ENSMUST00000228219 270 ntBASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 AC164437.3-201ENSMUST00000228323 347 ntBASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 AC135114.1-201ENSMUST00000228682 270 ntBASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Smarcd3Q6P9Z1 AC153506.1-201ENSMUST00000218768 2915 ntBASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Pdpk1-202ENSMUST00000102927 7161 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Gm12247-201ENSMUST00000117585 670 ntBASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Gm15617-201ENSMUST00000118973 771 ntBASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Gm6039-201ENSMUST00000121667 1250 ntBASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Olfml3-204ENSMUST00000169286 874 ntBASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms