Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.97□□□□□ -0.49
Upf3bQ3ULL6 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upf3bQ3ULL6 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Upf3bQ3ULL6 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upf3bQ3ULL6 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upf3bQ3ULL6 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upf3bQ3ULL6 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upf3bQ3ULL6 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upf3bQ3ULL6 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upf3bQ3ULL6 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upf3bQ3ULL6 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upf3bQ3ULL6 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Upf3bQ3ULL6 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.96□□□□□ -0.49
Upf3bQ3ULL6 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Upf3bQ3ULL6 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upf3bQ3ULL6 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upf3bQ3ULL6 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upf3bQ3ULL6 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upf3bQ3ULL6 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upf3bQ3ULL6 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Upf3bQ3ULL6 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upf3bQ3ULL6 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC11.96□□□□□ -0.49
Upf3bQ3ULL6 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Upf3bQ3ULL6 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upf3bQ3ULL6 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Upf3bQ3ULL6 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.96□□□□□ -0.49
Upf3bQ3ULL6 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC11.96□□□□□ -0.49
Upf3bQ3ULL6 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
Upf3bQ3ULL6 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Upf3bQ3ULL6 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Upf3bQ3ULL6 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Upf3bQ3ULL6 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Upf3bQ3ULL6 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Upf3bQ3ULL6 Gm43152-201ENSMUST00000202495 1638 ntBASIC11.96□□□□□ -0.5
Upf3bQ3ULL6 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Upf3bQ3ULL6 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Upf3bQ3ULL6 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.96□□□□□ -0.5
Upf3bQ3ULL6 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Upf3bQ3ULL6 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Gm8899-201ENSMUST00000214635 1332 ntBASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Gm1848-201ENSMUST00000120711 789 ntBASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Gm17709-201ENSMUST00000174536 1096 ntBASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Gm3508-201ENSMUST00000186012 792 ntBASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Gm44323-201ENSMUST00000198689 129 ntBASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Gm10020-201ENSMUST00000081993 612 ntBASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Gm10263-201ENSMUST00000085163 300 ntBASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 AC174797.1-201ENSMUST00000224339 1649 ntBASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Gm43972-201ENSMUST00000181398 1467 ntBASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Upf3bQ3ULL6 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Upf3bQ3ULL6 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upf3bQ3ULL6 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Upf3bQ3ULL6 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upf3bQ3ULL6 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Upf3bQ3ULL6 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Upf3bQ3ULL6 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms