Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim43aQ3TL54 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC11.85□□□□□ -0.51
Trim43aQ3TL54 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.85□□□□□ -0.51
Trim43aQ3TL54 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim43aQ3TL54 Gm12857-201ENSMUST00000117678 592 ntBASIC11.85□□□□□ -0.51
Trim43aQ3TL54 Gm11663-201ENSMUST00000117888 290 ntBASIC11.85□□□□□ -0.51
Trim43aQ3TL54 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.85□□□□□ -0.51
Trim43aQ3TL54 Mup-ps29-201ENSMUST00000122281 202 ntBASIC11.85□□□□□ -0.51
Trim43aQ3TL54 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim43aQ3TL54 Gm24074-201ENSMUST00000158178 260 ntBASIC11.85□□□□□ -0.51
Trim43aQ3TL54 Gm8815-201ENSMUST00000173809 620 ntBASIC11.85□□□□□ -0.51
Trim43aQ3TL54 Mir7677-201ENSMUST00000184226 67 ntBASIC11.85□□□□□ -0.51
Trim43aQ3TL54 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim43aQ3TL54 Gm5302-201ENSMUST00000202130 796 ntBASIC11.85□□□□□ -0.51
Trim43aQ3TL54 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim43aQ3TL54 Gm9445-201ENSMUST00000207454 1285 ntBASIC11.85□□□□□ -0.51
Trim43aQ3TL54 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.85□□□□□ -0.51
Trim43aQ3TL54 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC11.85□□□□□ -0.51
Trim43aQ3TL54 Nsd1-205ENSMUST00000224693 852 ntBASIC11.85□□□□□ -0.51
Trim43aQ3TL54 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.85□□□□□ -0.51
Trim43aQ3TL54 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trim43aQ3TL54 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim43aQ3TL54 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim43aQ3TL54 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.85□□□□□ -0.51
Trim43aQ3TL54 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim43aQ3TL54 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim43aQ3TL54 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trim43aQ3TL54 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim43aQ3TL54 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trim43aQ3TL54 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim43aQ3TL54 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim43aQ3TL54 Gm5171-201ENSMUST00000214944 1415 ntBASIC11.85□□□□□ -0.51
Trim43aQ3TL54 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim43aQ3TL54 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim43aQ3TL54 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim43aQ3TL54 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim43aQ3TL54 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim43aQ3TL54 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trim43aQ3TL54 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim43aQ3TL54 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim43aQ3TL54 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC11.84□□□□□ -0.51
Trim43aQ3TL54 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim43aQ3TL54 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trim43aQ3TL54 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Trim43aQ3TL54 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim43aQ3TL54 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim43aQ3TL54 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trim43aQ3TL54 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Trim43aQ3TL54 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim43aQ3TL54 Snord17-201ENSMUST00000104526 238 ntBASIC11.84□□□□□ -0.51
Trim43aQ3TL54 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.84□□□□□ -0.51
Trim43aQ3TL54 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC11.84□□□□□ -0.51
Trim43aQ3TL54 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.84□□□□□ -0.51
Trim43aQ3TL54 Mir5132-201ENSMUST00000175166 71 ntBASIC11.84□□□□□ -0.51
Trim43aQ3TL54 Gm3332-201ENSMUST00000189337 928 ntBASIC11.84□□□□□ -0.51
Trim43aQ3TL54 Gm28071-201ENSMUST00000190355 478 ntBASIC11.84□□□□□ -0.51
Trim43aQ3TL54 Gm43138-201ENSMUST00000199123 708 ntBASIC11.84□□□□□ -0.51
Trim43aQ3TL54 Gm32111-201ENSMUST00000207689 846 ntBASIC11.84□□□□□ -0.51
Trim43aQ3TL54 AC159002.1-201ENSMUST00000226714 924 ntBASIC11.84□□□□□ -0.51
Trim43aQ3TL54 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim43aQ3TL54 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim43aQ3TL54 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trim43aQ3TL54 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Trim43aQ3TL54 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC11.84□□□□□ -0.51
Trim43aQ3TL54 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim43aQ3TL54 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim43aQ3TL54 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim43aQ3TL54 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim43aQ3TL54 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim43aQ3TL54 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim43aQ3TL54 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim43aQ3TL54 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim43aQ3TL54 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trim43aQ3TL54 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trim43aQ3TL54 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC11.83□□□□□ -0.51
Trim43aQ3TL54 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trim43aQ3TL54 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC11.83□□□□□ -0.51
Trim43aQ3TL54 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Gm24749-201ENSMUST00000157838 343 ntBASIC11.83□□□□□ -0.52
Trim43aQ3TL54 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms