Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col9a2Q07643 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.1□□□□□ -0.47
Col9a2Q07643 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col9a2Q07643 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col9a2Q07643 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Col9a2Q07643 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Col9a2Q07643 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col9a2Q07643 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col9a2Q07643 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col9a2Q07643 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col9a2Q07643 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col9a2Q07643 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Col9a2Q07643 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col9a2Q07643 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col9a2Q07643 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col9a2Q07643 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC12.09□□□□□ -0.47
Col9a2Q07643 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col9a2Q07643 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
Col9a2Q07643 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col9a2Q07643 Gm15036-201ENSMUST00000118880 400 ntBASIC12.09□□□□□ -0.47
Col9a2Q07643 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col9a2Q07643 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC12.09□□□□□ -0.47
Col9a2Q07643 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC12.09□□□□□ -0.47
Col9a2Q07643 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col9a2Q07643 Gm36991-201ENSMUST00000191800 648 ntBASIC12.09□□□□□ -0.47
Col9a2Q07643 Gm42511-201ENSMUST00000196160 234 ntBASIC12.09□□□□□ -0.47
Col9a2Q07643 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC12.09□□□□□ -0.47
Col9a2Q07643 Gm45500-201ENSMUST00000211676 803 ntBASIC12.09□□□□□ -0.47
Col9a2Q07643 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC12.09□□□□□ -0.47
Col9a2Q07643 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col9a2Q07643 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Col9a2Q07643 Gm18499-201ENSMUST00000220808 1021 ntBASIC12.09□□□□□ -0.47
Col9a2Q07643 AC154361.2-201ENSMUST00000224747 943 ntBASIC12.09□□□□□ -0.47
Col9a2Q07643 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC12.09□□□□□ -0.47
Col9a2Q07643 Gm7536-201ENSMUST00000077389 444 ntBASIC12.09□□□□□ -0.47
Col9a2Q07643 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col9a2Q07643 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col9a2Q07643 Sertm1-202ENSMUST00000162201 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col9a2Q07643 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Col9a2Q07643 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col9a2Q07643 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col9a2Q07643 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Col9a2Q07643 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col9a2Q07643 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC12.09□□□□□ -0.47
Col9a2Q07643 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col9a2Q07643 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col9a2Q07643 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col9a2Q07643 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Col9a2Q07643 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Col9a2Q07643 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col9a2Q07643 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col9a2Q07643 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col9a2Q07643 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col9a2Q07643 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col9a2Q07643 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col9a2Q07643 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col9a2Q07643 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Col9a2Q07643 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col9a2Q07643 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col9a2Q07643 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Col9a2Q07643 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Col9a2Q07643 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC12.08□□□□□ -0.48
Col9a2Q07643 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC12.08□□□□□ -0.48
Col9a2Q07643 Gm13019-201ENSMUST00000120000 276 ntBASIC12.08□□□□□ -0.48
Col9a2Q07643 Gm5257-201ENSMUST00000121823 790 ntBASIC12.08□□□□□ -0.48
Col9a2Q07643 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC12.08□□□□□ -0.48
Col9a2Q07643 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC12.08□□□□□ -0.48
Col9a2Q07643 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Col9a2Q07643 Gm16165-201ENSMUST00000160140 795 ntBASIC12.08□□□□□ -0.48
Col9a2Q07643 Gm17070-201ENSMUST00000170463 784 ntBASIC12.08□□□□□ -0.48
Col9a2Q07643 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC12.08□□□□□ -0.48
Col9a2Q07643 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC12.08□□□□□ -0.48
Col9a2Q07643 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Col9a2Q07643 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC12.08□□□□□ -0.48
Col9a2Q07643 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC12.08□□□□□ -0.48
Col9a2Q07643 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC12.08□□□□□ -0.48
Col9a2Q07643 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col9a2Q07643 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Col9a2Q07643 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC12.08□□□□□ -0.48
Col9a2Q07643 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col9a2Q07643 Gm6560-201ENSMUST00000198588 1591 ntBASIC12.08□□□□□ -0.48
Col9a2Q07643 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.08□□□□□ -0.48
Col9a2Q07643 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col9a2Q07643 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col9a2Q07643 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col9a2Q07643 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Col9a2Q07643 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col9a2Q07643 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Col9a2Q07643 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col9a2Q07643 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col9a2Q07643 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col9a2Q07643 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col9a2Q07643 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a2Q07643 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a2Q07643 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a2Q07643 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a2Q07643 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a2Q07643 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a2Q07643 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col9a2Q07643 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms