Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lig3P97386 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lig3P97386 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lig3P97386 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lig3P97386 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lig3P97386 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lig3P97386 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lig3P97386 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lig3P97386 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC12.29□□□□□ -0.44
Lig3P97386 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lig3P97386 Gm11660-201ENSMUST00000120955 412 ntBASIC12.29□□□□□ -0.44
Lig3P97386 Gm12030-201ENSMUST00000121917 223 ntBASIC12.29□□□□□ -0.44
Lig3P97386 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC12.29□□□□□ -0.44
Lig3P97386 Gm25604-201ENSMUST00000158359 133 ntBASIC12.29□□□□□ -0.44
Lig3P97386 Gm26134-201ENSMUST00000178484 110 ntBASIC12.29□□□□□ -0.44
Lig3P97386 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lig3P97386 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.29□□□□□ -0.44
Lig3P97386 Gm43752-201ENSMUST00000198475 697 ntBASIC12.29□□□□□ -0.44
Lig3P97386 Gm44506-201ENSMUST00000206278 965 ntBASIC12.29□□□□□ -0.44
Lig3P97386 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.29□□□□□ -0.44
Lig3P97386 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lig3P97386 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.29□□□□□ -0.44
Lig3P97386 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC12.29□□□□□ -0.44
Lig3P97386 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC12.29□□□□□ -0.44
Lig3P97386 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lig3P97386 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lig3P97386 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.29□□□□□ -0.44
Lig3P97386 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lig3P97386 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lig3P97386 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lig3P97386 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.29□□□□□ -0.44
Lig3P97386 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.29□□□□□ -0.44
Lig3P97386 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lig3P97386 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lig3P97386 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lig3P97386 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lig3P97386 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Lig3P97386 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lig3P97386 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lig3P97386 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lig3P97386 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC12.28□□□□□ -0.44
Lig3P97386 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lig3P97386 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lig3P97386 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lig3P97386 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lig3P97386 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lig3P97386 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lig3P97386 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lig3P97386 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lig3P97386 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lig3P97386 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lig3P97386 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lig3P97386 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lig3P97386 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lig3P97386 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lig3P97386 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lig3P97386 Gm25766-201ENSMUST00000104101 131 ntBASIC12.28□□□□□ -0.44
Lig3P97386 Gm24791-201ENSMUST00000104284 131 ntBASIC12.28□□□□□ -0.44
Lig3P97386 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC12.28□□□□□ -0.44
Lig3P97386 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC12.28□□□□□ -0.44
Lig3P97386 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.28□□□□□ -0.44
Lig3P97386 Gm26989-201ENSMUST00000182608 749 ntBASIC12.28□□□□□ -0.44
Lig3P97386 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lig3P97386 Gm43852-201ENSMUST00000202098 917 ntBASIC12.28□□□□□ -0.44
Lig3P97386 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lig3P97386 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.28□□□□□ -0.44
Lig3P97386 Gm45410-201ENSMUST00000211331 1093 ntBASIC12.28□□□□□ -0.44
Lig3P97386 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lig3P97386 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC12.28□□□□□ -0.44
Lig3P97386 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Lig3P97386 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC12.28□□□□□ -0.44
Lig3P97386 Lgi3-203ENSMUST00000226548 1001 ntBASIC12.28□□□□□ -0.44
Lig3P97386 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lig3P97386 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC12.28□□□□□ -0.44
Lig3P97386 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lig3P97386 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lig3P97386 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Lig3P97386 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lig3P97386 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC12.28□□□□□ -0.44
Lig3P97386 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lig3P97386 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lig3P97386 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Lig3P97386 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Lig3P97386 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lig3P97386 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Lig3P97386 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Lig3P97386 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lig3P97386 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lig3P97386 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lig3P97386 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lig3P97386 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lig3P97386 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lig3P97386 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lig3P97386 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC12.27□□□□□ -0.44
Lig3P97386 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lig3P97386 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lig3P97386 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Lig3P97386 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Lig3P97386 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lig3P97386 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms