Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Rps28P62858 Gm10537-201ENSMUST00000192625 1698 ntBASIC6.33□□□□□ -1.4
Rps28P62858 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Rps28P62858 Def8-204ENSMUST00000108830 3191 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rps28P62858 Kif3a-203ENSMUST00000120613 3161 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rps28P62858 Prdm10-204ENSMUST00000215499 6772 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Rps28P62858 Knstrn-206ENSMUST00000134661 4602 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rps28P62858 Atg4a-201ENSMUST00000112971 2202 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rps28P62858 Gm4849-201ENSMUST00000188428 2246 ntBASIC6.33□□□□□ -1.4
Rps28P62858 Sipa1l2-201ENSMUST00000108775 6365 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rps28P62858 Nucb1-210ENSMUST00000211765 4853 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rps28P62858 Cap2-205ENSMUST00000225824 1634 ntBASIC6.33□□□□□ -1.4
Rps28P62858 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rps28P62858 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC6.33□□□□□ -1.4
Rps28P62858 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rps28P62858 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rps28P62858 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rps28P62858 Thap2-201ENSMUST00000020346 3681 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Rps28P62858 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Rps28P62858 Mfap3l-201ENSMUST00000034066 1896 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rps28P62858 Gm1141-201ENSMUST00000101495 2147 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Rps28P62858 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC6.33□□□□□ -1.4
Rps28P62858 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Rps28P62858 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
Rps28P62858 Gm11249-201ENSMUST00000117071 859 ntBASIC6.33□□□□□ -1.4
Rps28P62858 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
Rps28P62858 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC6.33□□□□□ -1.4
Rps28P62858 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Rps28P62858 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC6.33□□□□□ -1.4
Rps28P62858 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Rps28P62858 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rps28P62858 Myl6-201ENSMUST00000164181 665 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rps28P62858 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rps28P62858 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Rps28P62858 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC6.33□□□□□ -1.4
Rps28P62858 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC6.33□□□□□ -1.4
Rps28P62858 Gm37427-201ENSMUST00000192356 906 ntTSL 5 BASIC6.33□□□□□ -1.4
Rps28P62858 Gm43966-201ENSMUST00000203301 612 ntBASIC6.33□□□□□ -1.4
Rps28P62858 Gm44987-201ENSMUST00000206578 750 ntTSL 3 BASIC6.33□□□□□ -1.4
Rps28P62858 Gm7213-201ENSMUST00000215977 950 ntBASIC6.33□□□□□ -1.4
Rps28P62858 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC6.33□□□□□ -1.4
Rps28P62858 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rps28P62858 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rps28P62858 Gpatch2l-201ENSMUST00000071106 3829 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rps28P62858 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rps28P62858 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Rps28P62858 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Rps28P62858 Gm44797-201ENSMUST00000208780 1837 ntBASIC6.33□□□□□ -1.4
Rps28P62858 Zfp946-202ENSMUST00000120222 2926 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rps28P62858 Mis18bp1-201ENSMUST00000052201 4017 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rps28P62858 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rps28P62858 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rps28P62858 Kat6b-207ENSMUST00000182855 6791 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rps28P62858 Myrfl-201ENSMUST00000048229 3164 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rps28P62858 Bbs9-211ENSMUST00000150395 3425 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rps28P62858 Gm18638-201ENSMUST00000211293 1773 ntBASIC6.33□□□□□ -1.4
Rps28P62858 Tmem164-203ENSMUST00000112888 4221 ntTSL 3 BASIC6.33□□□□□ -1.4
Rps28P62858 Vmn1r51-203ENSMUST00000226542 4164 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Rps28P62858 Mcmdc2-201ENSMUST00000052843 2826 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Rps28P62858 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rps28P62858 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC6.33□□□□□ -1.4
Rps28P62858 Pkd1l2-201ENSMUST00000098375 7386 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
Rps28P62858 Trpm3-206ENSMUST00000099569 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rps28P62858 Slc17a1-202ENSMUST00000110413 1965 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rps28P62858 Numb-207ENSMUST00000129335 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rps28P62858 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Rps28P62858 Il1rl2-201ENSMUST00000095020 1950 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rps28P62858 Srbd1-201ENSMUST00000095187 3530 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Rps28P62858 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rps28P62858 Il1r1-201ENSMUST00000027241 5819 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rps28P62858 Oprl1-202ENSMUST00000108763 2971 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rps28P62858 Slc38a9-201ENSMUST00000052514 8910 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rps28P62858 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
Rps28P62858 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Rps28P62858 2610008E11Rik-201ENSMUST00000039271 4229 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rps28P62858 Rufy3-207ENSMUST00000199312 2182 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Rps28P62858 Ston2-203ENSMUST00000164713 2944 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Rps28P62858 Xpnpep2-203ENSMUST00000115000 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Rps28P62858 Gprc5c-202ENSMUST00000053361 3667 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Rps28P62858 B4galnt3-201ENSMUST00000057283 3677 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Rps28P62858 Sptbn1-202ENSMUST00000011877 8238 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Rps28P62858 Zmym3-203ENSMUST00000117901 5178 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Rps28P62858 Ctnnd1-214ENSMUST00000111688 6146 ntTSL 5 BASIC6.32□□□□□ -1.4
Rps28P62858 Pdcd1lg2-201ENSMUST00000112576 1645 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Rps28P62858 Gm2673-201ENSMUST00000120958 1608 ntBASIC6.32□□□□□ -1.4
Rps28P62858 Gm20507-201ENSMUST00000163245 2860 ntTSL 2 BASIC6.32□□□□□ -1.4
Rps28P62858 Olfr214-203ENSMUST00000214699 2610 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Rps28P62858 Olfr214-204ENSMUST00000215846 2605 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Rps28P62858 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Rps28P62858 Eif3l-201ENSMUST00000040518 1893 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Rps28P62858 Xdh-201ENSMUST00000024866 4587 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Rps28P62858 Zscan21-205ENSMUST00000110961 2310 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Rps28P62858 Cpa5-203ENSMUST00000115139 2070 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Rps28P62858 Gm45694-201ENSMUST00000212022 3251 ntBASIC6.32□□□□□ -1.4
Rps28P62858 Rai14-207ENSMUST00000227506 4732 ntAPPRIS ALT2 BASIC6.32□□□□□ -1.4
Rps28P62858 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Rps28P62858 Lmod1-201ENSMUST00000059352 3948 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Rps28P62858 Foxn3-201ENSMUST00000046859 7705 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Rps28P62858 Arhgap17-211ENSMUST00000207010 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Rps28P62858 Rbm43-206ENSMUST00000165313 1975 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms