Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Rfx3P48381 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Rfx3P48381 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Rfx3P48381 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Rfx3P48381 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Rfx3P48381 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Rfx3P48381 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Rfx3P48381 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Rfx3P48381 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC10.11□□□□□ -0.79
Rfx3P48381 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Rfx3P48381 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC10.11□□□□□ -0.79
Rfx3P48381 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Rfx3P48381 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Rfx3P48381 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Rfx3P48381 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Rfx3P48381 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Rfx3P48381 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Rfx3P48381 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Rfx3P48381 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Rfx3P48381 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Rfx3P48381 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Rfx3P48381 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Rfx3P48381 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Rfx3P48381 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Rfx3P48381 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Rfx3P48381 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC10.1□□□□□ -0.79
Rfx3P48381 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Rfx3P48381 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Rfx3P48381 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Rfx3P48381 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Rfx3P48381 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Rfx3P48381 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Rfx3P48381 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Rfx3P48381 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC10.1□□□□□ -0.79
Rfx3P48381 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Rfx3P48381 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Rfx3P48381 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC10.1□□□□□ -0.79
Rfx3P48381 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC10.1□□□□□ -0.79
Rfx3P48381 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC10.1□□□□□ -0.79
Rfx3P48381 Gm14028-201ENSMUST00000117434 479 ntBASIC10.1□□□□□ -0.79
Rfx3P48381 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC10.1□□□□□ -0.79
Rfx3P48381 Gm8199-201ENSMUST00000121323 823 ntBASIC10.1□□□□□ -0.79
Rfx3P48381 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC10.1□□□□□ -0.79
Rfx3P48381 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC10.1□□□□□ -0.79
Rfx3P48381 Gm20495-201ENSMUST00000173902 235 ntBASIC10.1□□□□□ -0.79
Rfx3P48381 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Rfx3P48381 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Rfx3P48381 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC10.1□□□□□ -0.79
Rfx3P48381 Gm27552-201ENSMUST00000183351 62 ntBASIC10.1□□□□□ -0.79
Rfx3P48381 Gm27844-201ENSMUST00000183613 62 ntBASIC10.1□□□□□ -0.79
Rfx3P48381 Gm28450-201ENSMUST00000187349 638 ntBASIC10.1□□□□□ -0.79
Rfx3P48381 Gm5733-201ENSMUST00000190232 939 ntBASIC10.1□□□□□ -0.79
Rfx3P48381 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC10.1□□□□□ -0.79
Rfx3P48381 AU022133-201ENSMUST00000200601 873 ntBASIC10.1□□□□□ -0.79
Rfx3P48381 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC10.1□□□□□ -0.79
Rfx3P48381 Gm6653-201ENSMUST00000218063 1288 ntBASIC10.1□□□□□ -0.79
Rfx3P48381 AC155637.1-201ENSMUST00000218560 636 ntBASIC10.1□□□□□ -0.79
Rfx3P48381 CT009713.8-202ENSMUST00000224732 385 ntBASIC10.1□□□□□ -0.79
Rfx3P48381 AC112945.1-201ENSMUST00000226413 514 ntBASIC10.1□□□□□ -0.79
Rfx3P48381 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Rfx3P48381 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
Rfx3P48381 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Rfx3P48381 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Rfx3P48381 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Rfx3P48381 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Rfx3P48381 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Rfx3P48381 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Rfx3P48381 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Rfx3P48381 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Rfx3P48381 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC10.1□□□□□ -0.79
Rfx3P48381 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC10.1□□□□□ -0.79
Rfx3P48381 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Rfx3P48381 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Rfx3P48381 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Rfx3P48381 Gm5124-202ENSMUST00000132683 2083 ntBASIC10.1□□□□□ -0.79
Rfx3P48381 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Rfx3P48381 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rfx3P48381 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC10.09□□□□□ -0.79
Rfx3P48381 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC10.09□□□□□ -0.79
Rfx3P48381 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rfx3P48381 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Rfx3P48381 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Rfx3P48381 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rfx3P48381 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rfx3P48381 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rfx3P48381 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rfx3P48381 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Rfx3P48381 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Rfx3P48381 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rfx3P48381 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC10.09□□□□□ -0.79
Rfx3P48381 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC10.09□□□□□ -0.79
Rfx3P48381 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Rfx3P48381 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Rfx3P48381 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Rfx3P48381 Gm15515-201ENSMUST00000117827 822 ntBASIC10.09□□□□□ -0.79
Rfx3P48381 Gm7857-201ENSMUST00000117957 358 ntBASIC10.09□□□□□ -0.79
Rfx3P48381 Gm12463-201ENSMUST00000118271 849 ntBASIC10.09□□□□□ -0.79
Rfx3P48381 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC10.09□□□□□ -0.79
Rfx3P48381 Gm7150-201ENSMUST00000122032 981 ntBASIC10.09□□□□□ -0.79
Rfx3P48381 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms